Gene Shewana3_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1122 
Symbol 
ID4476457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1320637 
End bp1321272 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content52% 
IMG OID639725665 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_868763 
Protein GI117919571 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGGG TTGCCTTAAC ATCGGCGGTG AATTTAGCTA AAAAGCTTCA GGAGGCGGGG 
ATCCGCCATC CAGCCGTTCT TAAGGCAATA TCCCGTACCC CGCGCGAGTT GTTTCTTGAT
AATGCGCTGG CCCATAAAGC CTACGAAAAT ACCGCCTTGC CTATAGGCCA AGGACAAACG
ATTTCTCAGC CTTATATCGT CGCGCGTATG ACAGAATTAC TGCTGCAACA TCAGCCGCAA
AAGGTACTTG AGGTAGGAAC GGGCTCTGGC TACCAAGCGG CGATCCTCGC GCAATTAGTG
CCAGAACTGT GCACCATTGA ACGTATCAAA GGGTTACAGA TCCAAGCGAG ACAAAGATTA
AAGCGACTCG ATCTGCATAA TGTGTCATTT AAATATGGCG ATGGCTGGCA GGGCTGGCCG
AATCGCAGCC CCTTTGATGG CATTATGGTC ACGGCGGCAG CGGCTAAGGT TCCCGAAGCC
TTATTGTCCC AGTTAGCTGA AGGGGGCGTG CTGATCATCC CTGTGGGGGA AGAGACGCAG
CAATTGATGC GCTTTACCCG CCGCTCGGAC CGTTTTAGTT CTGAAGTGAT CGAAACCGTC
AAATTTGTTC CCTTGATCAA TGGCGAGCTC GCTTAA
 
Protein sequence
MTRVALTSAV NLAKKLQEAG IRHPAVLKAI SRTPRELFLD NALAHKAYEN TALPIGQGQT 
ISQPYIVARM TELLLQHQPQ KVLEVGTGSG YQAAILAQLV PELCTIERIK GLQIQARQRL
KRLDLHNVSF KYGDGWQGWP NRSPFDGIMV TAAAAKVPEA LLSQLAEGGV LIIPVGEETQ
QLMRFTRRSD RFSSEVIETV KFVPLINGEL A