| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1121 |
|---|
| Symbol | surE |
|---|
| ID | 4476456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1319891 |
|---|
| End bp | 1320640 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639725664 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_868762 |
|---|
| Protein GI | 117919570 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA TCCTAGTCAG TAATGATGAT GGTGTGAATG CGCCGGGGAT CAGAGCCTTA
ACCGAGGCGC TCGCCGAAAT CGCTACTGTG ATGACGGTCG CGCCCGATCG TAATTGCTCC
GGCGCAAGTA ACTCTTTAAC CTTGACTAAC CCATTAAGAA TTAATAGGTT AGATAATGGT
TATATTTCGG TTCACGGTAC ACCCACGGAT TGCGTTCACT TAGCCATACG TGAGCTTTGT
GATGGTGAGC CGGATATGGT GGTATCGGGT ATCAATGCTG GCGCGAATAT GGGGGATGAC
ACTTTATATT CGGGCACGGT AGCGGCGGCG ATGGAGGGGC GGTTTTTAGG TTTCCCCGCC
GTTGCGATTT CGCTTAATGG TAAGGCATTA AAGCATTATC ACACCGCGGC TGTGTATGCG
CGGCGAATTG TGCAGGGGCT GTTAGCGCAT CCAATTGCGA GCGATCAGAT CCTCAATATC
AATGTGCCCG ATTTACCGCT CGATGAGATT AAAGGGATCA GGGTGACGCG CCTAGGTGCA
CGGCATAAGG CCGAAGGCAT AGTGCGAACA CAAGATCCTG CGGGGAAAGA GATTTTTTGG
CTCGGTCCAC CGGGTGTAGA ACAAGATGCG AGTGAAGGAA CGGACTTCCA TGCGGTAGCC
CATGGTTATG TGTCGATCAC TCCCTTAACC GTGGACTTGA CTGCGCATAG ACAATTATCG
GTATTGCAAG ATTGGGTAGA TAAAATATGA
|
|---|
| Protein sequence | MIRILVSNDD GVNAPGIRAL TEALAEIATV MTVAPDRNCS GASNSLTLTN PLRINRLDNG
YISVHGTPTD CVHLAIRELC DGEPDMVVSG INAGANMGDD TLYSGTVAAA MEGRFLGFPA
VAISLNGKAL KHYHTAAVYA RRIVQGLLAH PIASDQILNI NVPDLPLDEI KGIRVTRLGA
RHKAEGIVRT QDPAGKEIFW LGPPGVEQDA SEGTDFHAVA HGYVSITPLT VDLTAHRQLS
VLQDWVDKI
|
|---|
| |