| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1118 |
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| Symbol | ispD |
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| ID | 4476453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1317457 |
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| End bp | 1318206 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639725661 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_868759 |
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| Protein GI | 117919567 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCG TATTAGAGGC CGCGCCGCAG GTCGAAACCC AAGTTGCAGT TCAAATTGAT
CCTTTCTCGC ACCATGTGGT GGCGATTGTG CCCGCCGCGG GGATTGGCAG CCGCATGGGC
GCGGGCAAAC CCAAACAATA TTTAACCTTG CTGGGACAAA GCATTCTGGC TCATACCTTA
GATAAGTTAT TATCCCATCC GCAAATTAAC CAAGTGATTG TGGCGCTGCA TCCTGAGGAT
ACCAAGTTTG CCGCGTTGCC GCAGGCCAAG CATCCCAAGC TGGTAACTGT CATTGGCGGT
TCTGAGCGTG CCGACTCGGT GCTGGCGGCA CTCGATAAGG CGCCTGATAA TGGTTGGGCT
TTAGTTCACG ATGCGGCCAG ACCCTGCCTG ACGGCGCAAG ACATTGATAA ATTGTTGGCA
TCGCGGGTGC ACTTTCCCCA AGGGGCGATT TTAGCCATGC CTGTGCGGGA TACCATGAAG
CGCGCCAATA GCTTAGGTGA AATTAGCTCG ACTGTTTGCC GCGATAATCT CTGGCATGCG
TTGACACCGC AGTTATTCCC AACCTCCTTG TTGCGATTAC ATTTAAAAGC CGCGCTTGCC
GCGGGGGCTG TCGTGACCGA TGAAGCCTCG GCGATGGAGT GGGCGGGCAT TTCCCCTGGT
TTGGTCGCGG GGCGGGCGGA TAACATTAAA GTCACCCATC CCGATGATTT GGAGTTGGCA
GAACTTTTTT TACTGCGCGC GAATGCTTGA
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| Protein sequence | MDTVLEAAPQ VETQVAVQID PFSHHVVAIV PAAGIGSRMG AGKPKQYLTL LGQSILAHTL
DKLLSHPQIN QVIVALHPED TKFAALPQAK HPKLVTVIGG SERADSVLAA LDKAPDNGWA
LVHDAARPCL TAQDIDKLLA SRVHFPQGAI LAMPVRDTMK RANSLGEISS TVCRDNLWHA
LTPQLFPTSL LRLHLKAALA AGAVVTDEAS AMEWAGISPG LVAGRADNIK VTHPDDLELA
ELFLLRANA
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