| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1109 |
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| Symbol | |
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| ID | 4476444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1302416 |
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| End bp | 1305223 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725652 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_868750 |
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| Protein GI | 117919558 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.527009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTG TCAACAACAT GACCAAATAC AGCTTACGTT CCTGGGTTCT GGTGCTTGCG
CTTGCGCCGA CGATCTTAGT CGGTATTCTG CTGGGCAGCT ACTTTACCAT AAATCGCTTC
TATGAACTCG AAGATACGCT GATTGAACAG GGCAGCAATA TTATCGAACC TTTAGCGATT
GCCAGTGAAG TGGGACTCGT GGGCAATGAC AGGGAAGCGA CGAAACGGCT CCTTGCCGCA
GCCCAACTGA ATAAATCCAC GCTCGTTAAA TCTATCGCTA TTTTTGACAT TCAAAATCAA
CTGTTTGTCA CATCGCATTA CCACAAAGAT TTCGAAATCA TGCGCTATAA AGAGGCGCTG
ACTAATCTGC ACAAAACCGA AATCGAACAT GTGGGCGACA GCCTTATCCT ACGCACACCG
ATTTTTGCCA CCGCACCACC TGCGCCGGGC GCGCCCGTCA ATTTTGATAT CCAAACCGAT
AATGGCGAGT TGCTTGGCTA TATTTCGGTG ATTATCAATA AAGAACGCGC GCTACTCGAA
CAACACAGGG CCGCCGTGGC CGCCTTTATT ATCGTCTTGA TTGGGGTGCA ATTAAACCTG
TTGTTTACCT TTCGTCTGGT TAAAAACGTC ACCCAGCCGA TTACCGAAAT GGTGCGGGTG
GTCGCCAAAA TTCGCGAGGG TAAACTCGAT GCCAGACTCG AGGGTAATCT TATCGGAGAG
CTGGATTTAC TCAAACGCGG TATTAACGCC ATGGCGGGCT CGCTATCGGA ATATCACGAT
GAGATGCAGC AAAATATCGA TCAGGCAACT TCGGATCTGC GGGAAACCTT AGAGCAGATT
GAGATCCAAA ACGTCGAGCT CGACTTAGCC AAAAAACGCG CGCTGGAGGC CAGCCGCATT
AAGTCGGAAT TCTTGGCGAA CATGTCCCAC GAGCTGCGCA CACCATTAAA CGGCGTGATA
GGCTTTGCCC GTCAACTCGT TAAAACCCCG CTACACTCGA GCCAAGTCGA TTACATTAAT
ACCATCGAGC GCAGCGCGAC TAACCTACTG GCGATTATCA ACGATATTCT CGACTTCTCT
AAACTCGAAG CCGGTAAAAT GGTGCTAGAA AACATGCCAT TCGGCCTAAG GGAAACCCTA
GGTGAGACAA TCACTTTAAT CTCCGGCAGC GCGCAGGCGA AAGGGCTGGA GTTAGTGGTC
GATATTGCAC CCAACGTCCC CGACAATGTT AACGGCGATG CTATGCGTGT TTGCCAAATT
ATCAATAACT TAGTGGGAAA TGCCATCAAG TTTACCGATT CGGGCAGCGT GTTAGTCAAG
TTAGAGTTAC AAAACCAGAC CGATGATCAA GTGGTACTGC GCTGTGATGT GATTGATACC
GGCATTGGAA TTGATGAAAA CCAACAGGAC TTCCTGTTCC AAGCCTTTGG CCAAGCGGAC
TCCTCGATTT CTCGCCGCTT TGGTGGAACA GGGCTAGGGC TGGTCATCAC TAAGCGCCTC
GTCAACCAAA TGGGTGGCCA AATTGGCTTT ACCTCTTCGG TGGATAAAGG GTCTAACTTC
TGGTTCACTC TGCCATTGGG CCTAGGTCAA TTCCAGATTG GCGATTCGCT ACCCTTTGAA
AAGCTTAAAG ATAAAACCGT GCTGTTTTAT GAGCCCAGAG TACTCACCCA TTCGGTTATT
AGTCGCCAGC TAAAACAGTG GGATACAAAA GTCACTCACC ATCAACACAT TCCGAGCTTG
CTGACGACGC TCTCGACCAC TGAGCATCAG TTCGATTATG TGCTGTTGAG TTGCCATGGA
TTTAGCAATC CGAATCAATT GGTCAGCACC TTAAATCAAG CTAAGAGTAA AACAGATTGC
TTGATCGTGC TGTTCGATTG CCAAGAGCAG GAAGTACTAA GCCAGTTTAT TCGCCCCAAT
GCCGATGTGG TGTTGTCACT GCCGGTGAGT GAACATCAAT TGGCGCGTAA TATGCTCTAT
CCACCAATGG AATATGACAT TTTACCTCCC GTGGCGATTA CCGTCCCCGC CGCGCGCCAA
TCCCTTACGG TGTTGGCGGT GGATGATAAC TTTGCCAATT TAAAACTGAT TGATACGCTG
CTTAACGAGT TAGTGACGAC CGTCATCGCC GTTAACAGCG GTGAAGAAGC CGTCAAACAA
GCCAAGAGTC GCACCTTTGA CCTTATCTTT ATGGATATCC AGATGCCGGG CACCGACGGC
ATCAGCGCCA CCAAGCAAAT CCGCCAAGGG TCGATGAACC GCAACACGCC CATTATTGCC
GTGACCGCCC ACGCGATTGC CGAGGAACGA GAGCTGATTT TAGGCAGCGG CATGGATGGT
TACTTGCCTA AGCCCATAGA TGAAGCCGCC CTCAAAGCGG AAATAAACCG CTGGATCACT
CGGCCCAAGT TCACCCACTT CGATTTACAC ACCCTCAACT GGGATCTTTG CTTAACCCAA
GCCAACCATA AGTCGGATTT AGCCTTAGAT ATGTTGCGCA TGTTATTGGA TTCCTTGCCA
CAAACGGTCT CGGCAATTGA GACGGCGCTG AGTCAGAACG ATCAAGCGAC TATGCTCACC
ACTATCCACA AACTCCATGG AGCCAGTTGC TATTGCGGAG TACCGACCAC ACAGCGATTA
TGCCAAGAGA TTGAATCGGC ATTGAAACGA GATGCTCGTG TCGAAGATCT CGAACCGGAA
ATACTAGAGT TACTTGATGA GCTAACTAAG GTAGAATCGG CGGCAAAACA AGTGCTATCA
CAGCTATCAG CGGAAATAAC AGATGACCAA AAAAACGGGC TTCTTTAA
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| Protein sequence | MNPVNNMTKY SLRSWVLVLA LAPTILVGIL LGSYFTINRF YELEDTLIEQ GSNIIEPLAI
ASEVGLVGND REATKRLLAA AQLNKSTLVK SIAIFDIQNQ LFVTSHYHKD FEIMRYKEAL
TNLHKTEIEH VGDSLILRTP IFATAPPAPG APVNFDIQTD NGELLGYISV IINKERALLE
QHRAAVAAFI IVLIGVQLNL LFTFRLVKNV TQPITEMVRV VAKIREGKLD ARLEGNLIGE
LDLLKRGINA MAGSLSEYHD EMQQNIDQAT SDLRETLEQI EIQNVELDLA KKRALEASRI
KSEFLANMSH ELRTPLNGVI GFARQLVKTP LHSSQVDYIN TIERSATNLL AIINDILDFS
KLEAGKMVLE NMPFGLRETL GETITLISGS AQAKGLELVV DIAPNVPDNV NGDAMRVCQI
INNLVGNAIK FTDSGSVLVK LELQNQTDDQ VVLRCDVIDT GIGIDENQQD FLFQAFGQAD
SSISRRFGGT GLGLVITKRL VNQMGGQIGF TSSVDKGSNF WFTLPLGLGQ FQIGDSLPFE
KLKDKTVLFY EPRVLTHSVI SRQLKQWDTK VTHHQHIPSL LTTLSTTEHQ FDYVLLSCHG
FSNPNQLVST LNQAKSKTDC LIVLFDCQEQ EVLSQFIRPN ADVVLSLPVS EHQLARNMLY
PPMEYDILPP VAITVPAARQ SLTVLAVDDN FANLKLIDTL LNELVTTVIA VNSGEEAVKQ
AKSRTFDLIF MDIQMPGTDG ISATKQIRQG SMNRNTPIIA VTAHAIAEER ELILGSGMDG
YLPKPIDEAA LKAEINRWIT RPKFTHFDLH TLNWDLCLTQ ANHKSDLALD MLRMLLDSLP
QTVSAIETAL SQNDQATMLT TIHKLHGASC YCGVPTTQRL CQEIESALKR DARVEDLEPE
ILELLDELTK VESAAKQVLS QLSAEITDDQ KNGLL
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