| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1106 |
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| Symbol | |
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| ID | 4476441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1300340 |
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| End bp | 1301239 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639725649 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_868747 |
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| Protein GI | 117919555 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.399323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATG ATATAGGCGC CGAGCTGCAG TTAATTTATC TGTTTGTGCA TTTAGTGAAT
GCGGGGAGTT TTTCCCAAGC GGCTAAAGAG CTCGATATGC CCATCGCCAC TGTGAGCCGC
AAGCTGGCCA AACTTGAGGA GAAACTCGAT AAGCAATTGT TTATGCGTAG CACTCGTAAG
CTGCGGTTAA CCGAAGAAGG TCTAGCTTTA TTTCAACGCT ACCAGAGTGT CATTGCCCAA
TTTGATGAAC TCAGTGGTGT TGGCAGTGAT AAGCCCGAAG GAACATTGCG AATAGCTGCG
CCGATTTCGA TTATCTCCAT CATCTTTATC CGTGCACTGA ACGAATTTGG GCGTTTATAT
CCCGATATTC GCCTGCATAT TTCCCAAAGC AATGAGTTGG TGGATTTGAT CGATAAAGGG
ATCGATGTGG CGATTGTGGG CGGTGCCCAG CCCGATTCCT CTTGGGTGTC GAGCACCTTA
GGCGAACTCG ATTACCGCCT GTTTGCGACG CCGGAATATT TAGCCTCGGC GCCTAAGTTA
ACCCATCCCG ATGATCTTGA AGCCCATCAG TTAATTAAAG TGTGGCCACT GTTTAACTGG
CACTTAAAGC ACTCGAATGG CGAGTCGTTT TATTTTAATG GCCCGACAAA ACTCACGCTC
ACGGATCTAC ACGGGGCGAT TCAGGCGACT CTCGATCACG GCGGCATTCT CTATGGCCCA
GAATTATTTG TAAAACAGCA GATTAAAGAG GGACAGTTAA AAGTACTCTT GCCCGAATGG
ATAGGTGAGC AGCGCAGAAT ATCGATTTTG TATCACCAGC GGAGTCAGCA GCCGCTAAAG
GTAAAAGTAT TTATAGAGTT TATGCAGTCT AAGGCGCCCG AGCTGTTTTC GATGATTTAA
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| Protein sequence | MADDIGAELQ LIYLFVHLVN AGSFSQAAKE LDMPIATVSR KLAKLEEKLD KQLFMRSTRK
LRLTEEGLAL FQRYQSVIAQ FDELSGVGSD KPEGTLRIAA PISIISIIFI RALNEFGRLY
PDIRLHISQS NELVDLIDKG IDVAIVGGAQ PDSSWVSSTL GELDYRLFAT PEYLASAPKL
THPDDLEAHQ LIKVWPLFNW HLKHSNGESF YFNGPTKLTL TDLHGAIQAT LDHGGILYGP
ELFVKQQIKE GQLKVLLPEW IGEQRRISIL YHQRSQQPLK VKVFIEFMQS KAPELFSMI
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