| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1101 |
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| Symbol | |
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| ID | 4476436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1294501 |
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| End bp | 1295457 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639725644 |
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| Product | thiamine-monophosphate kinase |
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| Protein accession | YP_868742 |
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| Protein GI | 117919550 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00155289 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.489485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAAT TCCAACTTAT TGAATGTTAT TTCAATCACC GCGGCCCCAC GCGCCGTGAT
GTCAAACTGA GTATTGGCGA TGATTGTGCC CTAGTGCAGC CCGCCGAAAA CAAGTCGATC
GCCATCTCCT GCGATACCTT AGTCGAAAAC GTTCACTTCT TCCCCGATAT TCCCCCACAA
GCCTTAGGTT ACAAAGCCTT AGCAGTGAAT CTTTCCGATT TAGCGGCCAT GGGGGCTGAG
CCTGCTTGGA TGACGCTTGC GCTTACCTTA CCAGAGGTTA ACGAAGCCTG GCTGAGTGGT
TTTAGTGAGG GACTCTTCGA AGCGGCGGAA TACTATGGTA TTGCCCTTAT TGGCGGCGAT
ACTACCCGCG GCCCTAGAGC CATTAACATT ACCGTGCATG GGCAAGTGCC GCAGGGTAAG
GCGCTGACTC GCCACGGTGC AAAAGCGGGT GACTGGATTT ATGTGACCGG TACACTCGGT
GATTCGGCTT TAGGTCTGGA TTTGATCCGT GGTGTGCAGC ATGCGCGTGC GGAGCATAAA
GAGTTCTTAA TCAATCGCCA TTATCGTCCG ACGCCTCGAG TGTTAGCGGG TCAGTCGTTA
CGGTCTTTGG CATCCAGTGC CATCGACTTA TCCGACGGTT TTATCTCCGA CATTGGCCAT
ATCCTCAAAG CATCGCAGGT AGGCGCGGTT GTGGATGTGG GCACGATTCC GTTGTCCCGC
GCCATGCAAG ATACCGTGAG CGAAGAGCAT GCCTTAGGTT ATGCGCTAAC AGGGGGCGAG
GATTACGAGC TGCTCTTTAC CGTGCCAGAG GCGCAAAAAG GTGCGTTAGA AACGGCGTTG
AGCCACGCTG GGACTAAGTT TGTGCGGGTT GGGCAAATTT GCGCGGGCAG TAAACTTAAG
TTGCAACTCA ATGGTGAGCC CTTTACGCCG CCATATCATG GTTTTGAGCA TTTTTAA
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| Protein sequence | MKEFQLIECY FNHRGPTRRD VKLSIGDDCA LVQPAENKSI AISCDTLVEN VHFFPDIPPQ
ALGYKALAVN LSDLAAMGAE PAWMTLALTL PEVNEAWLSG FSEGLFEAAE YYGIALIGGD
TTRGPRAINI TVHGQVPQGK ALTRHGAKAG DWIYVTGTLG DSALGLDLIR GVQHARAEHK
EFLINRHYRP TPRVLAGQSL RSLASSAIDL SDGFISDIGH ILKASQVGAV VDVGTIPLSR
AMQDTVSEEH ALGYALTGGE DYELLFTVPE AQKGALETAL SHAGTKFVRV GQICAGSKLK
LQLNGEPFTP PYHGFEHF
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