| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1099 |
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| Symbol | ribH |
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| ID | 4476434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1293461 |
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| End bp | 1294003 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639725642 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_868740 |
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| Protein GI | 117919548 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000581145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.593751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGACTGTGG TATCATGTCG CCACTTTTCG CCCAAGCCGG GTGCTTTAGC TAAATTAGGT
AAGAAAATGA ACGTAGTTCA AGGTAATATC GAAGCGAAGA ATGCCAAAGT TGCGATTGTA
ATTTCGCGTT TTAACAGCTT TTTAGTTGAG AGCTTGCTTG AAAGTGCACT TGACACGCTG
AAACGTTTTG GCCAAGTCAG TGATGAAAAC ATCACTGTCG TCCGTGTACC TGGTGCGGTT
GAGTTACCGC TGGCTGCACG TCGTGTTGCC GCAAGTGGTA AGTTTGACGG TATCATCGCA
CTTGGTGCTG TGATCCGTGG TGGTACCCCT CATTTTGATT TTGTTGCAGG TGAATGTAAC
AAAGGTCTAG CTCAAATCGC ATTAGAGTTC GATCTGCCCG TTGCCTTCGG TGTATTGACG
ACAGATACCA TTGAACAAGC CATTGAGCGT TCAGGTACTA AAGCAGGTAA CAAGGGCGGC
GAAGCTGCAC TAAGCTTGCT TGAAATGGTC AATGTTCTGC AACAGCTAGA ACAACAGTTG
TAA
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| Protein sequence | MTVVSCRHFS PKPGALAKLG KKMNVVQGNI EAKNAKVAIV ISRFNSFLVE SLLESALDTL
KRFGQVSDEN ITVVRVPGAV ELPLAARRVA ASGKFDGIIA LGAVIRGGTP HFDFVAGECN
KGLAQIALEF DLPVAFGVLT TDTIEQAIER SGTKAGNKGG EAALSLLEMV NVLQQLEQQL
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