Gene Shewana3_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1098 
Symbol 
ID4476433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand+ 
Start bp1292284 
End bp1293387 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content50% 
IMG OID639725641 
ProductGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_868739 
Protein GI117919547 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000281085 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.665879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC ACAGTATAGA AGAGATCATC GAGGATATTC GTCAAGGCAA AATGGTTATT 
TTGATGGATG ACGAAGACAG AGAAAACGAA GGCGACCTGA TTATGGCGGC CGAGCTGGTG 
ACGCCTGAAG CGATTAACTT TATGGCGAAA TACGGCCGTG GACTTATCTG CCAAACGATG 
ACTAAGGCCC GTTGTCAGCA GCTAAACCTG CCCTTGATGG TGACTAATAA CAATGCGCAG 
TTCTCGACTA ACTTTACGGT ATCGATTGAA GCGGCAGAAG GTGTAACCAC CGGGATTTCG 
GCCCACGATC GCGCTGTAAC GGTAAAAGCT GCCGTGGCTA AAGATGCCAA GGCATCGGAT 
TTAGTACAAC CTGGTCATAT CTTCCCATTA ATGGCGCAGG ACGGCGGCGT GTTAACCCGC 
GCAGGTCACA CGGAAGCGGG TTGTGATTTA GCCCGTTTAG CAGGACTTGA GCCATCGGGG 
GTGATTGTTG AGATCCTCAA TGAAGACGGC ACTATGGCTC GTCGCCCCGA TTTAGAGATT 
TTCTCTGAAT TACACGGGAT TAAAATCGGC ACTATTGCGG CGCTTATCGA ATACCGCAAC 
ACCAAAGAAA CCACTGTCGT GCGCGAAGCC AAATGTAAAC TGCCAACCCG CTTTGGCGAG 
TTCGACATGG TGACCTTTAG GGATACTATC GACAATCAAC TGCACTTTGC CTTAGTGAAG 
GGCGAGGTGA AACCGGATTG TTTAGTGCGC GTACACTTAC AAAATACCTT CAACGATTTA 
CTCCACTCAG AGCGCGATCA GCAGCGTAGC TGGCCGCTTG AAAAAGCCAT GGAGCGCATT 
TCTGCCGAAG GTGGAGTGTT GGTGCTACTG GGCAATCAAG AGCATACCTG TGAAATTCTC 
TCTAAAGTCA AAGCCTTTGA AGCAGAAGAT CAAGGTCAAG CGCCAGCCTC TGCAAAATGG 
CAAGGCACTT CACGCCGCGT GGGTGTAGGT TCGCAAATCC TTGCCAGCCT TGGGGTAACC 
AAAATGCGTC TCTTGAGTTC GCCTAAGCGT TATCACTCGC TCTCTGGCTT TGGGCTTGAA 
GTGACTGAAT ACGTAGCGGA GTAA
 
Protein sequence
MALHSIEEII EDIRQGKMVI LMDDEDRENE GDLIMAAELV TPEAINFMAK YGRGLICQTM 
TKARCQQLNL PLMVTNNNAQ FSTNFTVSIE AAEGVTTGIS AHDRAVTVKA AVAKDAKASD 
LVQPGHIFPL MAQDGGVLTR AGHTEAGCDL ARLAGLEPSG VIVEILNEDG TMARRPDLEI 
FSELHGIKIG TIAALIEYRN TKETTVVREA KCKLPTRFGE FDMVTFRDTI DNQLHFALVK 
GEVKPDCLVR VHLQNTFNDL LHSERDQQRS WPLEKAMERI SAEGGVLVLL GNQEHTCEIL 
SKVKAFEAED QGQAPASAKW QGTSRRVGVG SQILASLGVT KMRLLSSPKR YHSLSGFGLE 
VTEYVAE