| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1087 |
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| Symbol | |
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| ID | 4476422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1278278 |
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| End bp | 1281949 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725630 |
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| Product | undecaprenol kinase., rRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_868728 |
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| Protein GI | 117919536 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.485932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGT TTTTATTTAA ATGCCAGCCA CATAATCGGT TGGTATTCTC TATTGCTCGT
GCTTCTTCAC TGATATCCCT TAACTCTCGA CCACAAAACG TTCGCCATAC GTTAACGTCC
GTCATTTCCC TTATTCTGTC GAGTGTAATT GTGAGTGCGG CCAGCTTATT TATGGCGCCG
ACTCACGCCG ATGATACTGA GCTTTATGTT TTCGAGGCAT CGGCCCGTAA TGGCTCGCGT
CCTCAGGTAC TGATTATTTT CGATAACTCG GGCAGCATGA GCAGTCTCGC CTATGATGTC
GAGGCGCCCT ACGAGAATAA GCGCGCAGTA AATTATGCCC AATCGGGTAA TTTATTCTAT
AGCCGAGGCT CATCGGAAAA CGCGGCAGCG CCCAACCCTA ATTCACGGAG GGAAAAACGT
AAGTTCAAAG GGGCGCTCAA TGGCTGCGAA AGTTCATGGG AATATCTCAA TCGTTACGGC
ACCTTTACGG GGTTTTTTAG GGAGTATGGT TTTTCGGGAA GCTCGGGGTC TTGGAGAGAG
TTTTCAGAGC TTAACGGCAG TTCCATTTCC GCTGTCGATT GTTTTGAGGA TATTCAGGAA
AACAAGTTCG GTAACGCGGT AGGCGAAGCT GAAGGTTTAC CCGTGGATAG CCTAGGGACG
GCAAGCAAAC CGGTTCGTTA CACAAAGGCC AGTACTAGCT CGTCAGACAG CGCAAAGTCT
GCGGCTAAGG CCAAGGCCGA AAAAACCGCG TTTGGTACTG GTAAAGTGGT TACCGTCTAT
ACCGAAGATT ACTTAAACTG GCTGCATGGC CCGAAAACTA AGGTCAATAA AACACGACTG
GCCTTGGCTA AAGATGCGAT TGAAAGTGTG ATTCTAACCA CGCCGGGTGT GGATTTTGGC
CTAGCGATTT TTAATATGAA TGGCCCCTAT GATGGCCAGC GTGATGGTGG ACGGATTATC
TCTGGGATTA AGCCCATGTC CGCTGCAGCT AAAATTGATT TGCTCAAAGG GATCAATGAT
ATTAACTACG CTCAAAATAC CCCCTTATGC GAAACCCTCT ATGAGGCGTA CCGCTATTTT
GGCGGGCAGA GTCAGTATTT TGGTGACGAC GATAGCGATT ACCATTATTA CGATCAGTGG
GGGCGCTATC AAGGGACTTA CCAAGCGAAA AGAAACCCTT TTACTGATCC CGAAGCATTA
GTCGTGGGGA CCAATAACTA TAACTCGCCT TTCAAACGTT GCCAAAACGA AGCCTATATC
ATCTATATCA CCGACGGTGA ACCCACCTTG GATAACGCGG CCGATGGTTT GGTTGAACAG
TTAACTAAAG GTGTGGGAAA ACATACCTCA AGTCCTGTCA GTTACCTTAG TGCGCTTTCG
GGCTGGATGA GAAATGAAGA CGTCAATCCT AATTCTGCGG GTAAACAAAC CGTTAGAACC
TTTACCATCG GCTTTAGTGA AGGTGCCGCC AGTGCCGAAC ATTTACTGAA GCAGACCGCC
GAAAATGGCG GAGGTAAGTA TTTCGATGCG ACCGATGCCA GTAAATTACG CTCTTCATTA
CAAACGGCCC TGAACAATAT CCTCGAAAAA AATGCCAGCT TTACCTCTCC CTCGGTGGCA
AGTAATAACT TTAACCGAAC ACAAACCTTT GATTCCGCTT ATTACTCTAT GTTTTTGCCG
AACAAAGGGC CGAGATGGTT AGGCAATATC AAGAAATTTA AGGTGACCAG TAGTGGTGAT
GTTGTCGATA GCAAAGGCAA CAATGCGATA GGTGAAGATG GCAACATCAA AGCCGAGGCC
TGCTCCTATT GGACCTCGGC CGAAGAGTGT GGTGCGAGTG GCGATGGTAA CGATGTGAAG
CGGGGTGGAG TGCTAGGTGC AATGCAGCAG GCGAGTAGTC GCACCTTGTA CAGTAATTTA
GGCACGGGAT TAAGCCCATT TACCCTGTCG AATGCCTCTC GCAAAGCGGG GGGCGATGCC
CGTTTGGCCT TGTATATGGG GGTCGATGAA ACTGAGCTTA GCGAGCATTT TGATTGGGCC
AAGGGCATCG ATGTCGATAA TGACAAGAAT CAGGACCTCA GTGCCGCGAG TGGCGCAACC
CCCAATTGGC GCGCCGATAT TATGGGGGAT GCTTTACATT CCAAACCCTT AGCACTCAAT
TTTGGCTCTG AAGACCAGCC CGATATTCGG ATTATCGTGG GGACTAACCA TGGGTTCCTG
CATATGTTCA AGGATGAAGG CGATAGCGTG TCTGAGACTT GGGGTTTTAT CCCCTATGAG
TTGCTGCCGA ATTTTCGCGA TCTGAAGGCG AACGCGCCAA CGGGCGTGCA CTCGGTATAC
GGCATCGATG GCTCGCCAGT CGCTTACACC AAAATGCAGG GCAAACGTAT TGAAAAAGCG
TGGGTGTTTG TGGGGATGCG CCGTGGGGGA AATGCTTATT ATGCCCTCGA TATCACCTCC
CCCGATAATC CTACTTTTAT GTGGAGGATT GATGCTAGTT CTCCGGGAAT GGGCGAATTA
GGTCAATCCT GGTCGACGCC TGTCGTCACC ACGATTCCGA GTGCCACAGG CGATAAACCT
GTGCTGATCT TCGGTGCGGG ATATACCCCC GCGACCAAGG ATGGCGCCGA GATTGGCAGT
GACGATAGCC AAGGTCGAGG CGTGTTTATT GTCGACGCCG AAACGGGGGC ATTAATTCAT
CAATTTGGTG GCAATGGCGC CAACACCCTA TTGCCGGGGA TTGCCAACAG TATTCCGAGC
AGCGTTGCCG TGTTAGATGG TAATGGCGAT GGCCGAACGG ATAGGATCTA TGCCACAGAC
ACACAAGGGA ATGTGTGGCG AATGGACATG CCTTCGGCAA ATACTTCGAC TTGGTCGGGA
TTTAAATTTG CCGCATTAGG GGACAGGAGT TCGGTGGCTG GGGATCGGCG ATTTTTCTCG
GGGCCGGCGG TTGCGCAGAC CATGGTCACC AATACCTTCG AGTTGACTCA GGTGGTGAAT
GGGAAATCGA CCAAGACAGT GACTAAGCAG AATATTCCCT ACGATGCCGT AGTTGTAGGC
AGCGGTCACA GGGCGAAGCC TAGCGATGCG TCCCGTTCGG ATATGTTTTT TGCCTTGCAA
GATAGGAACA TAGTGACTCA ATCATTCCAA GGTAAACCTA ATCAAAAGCC AGTGCCGAGC
GCCTTAACCT TAAGTGACTT ATACGATGTA ACTACGGCGG CGCCAAATGA TAAAGCCAGC
GAAATCGCTT TTGGTCAAAA GCGGGGCTGG TACTATAACT TCTCCCGCAA AGGTGAAAAG
AGTCTATCTT CTGCGACCAT AGTTCAGGGC GAGGTGTATT TCACTAGTTT TGTGCCAGGC
AGTGATGCTT CGGTGAACCA ATGTTTGAGT TCGGGTAAGG GCTACCTCTA TAAAAAGAAC
TTACACAAGG GCACAAATGG CTATAGAACC GATTTCTTGT ATGCCGGTGA ACTGGTTTTG
GATACGCCGC AATTGGTTAT CCCCCCGGCT GCGCAGCCCG ATGCCCCCAA TGCTAAGGCT
CCCACTCCAG ATATGTTTTT GATTGGGATT GGTAAGGCGG TGCCCGAGGA GGCGACTTGT
GAGAGTGGTA ATCCTAAGTG TATCGGCAGT GGTCCCAAGG CAAACAAGAT TTACTACTAC
GTAGATCAAT GA
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| Protein sequence | MIPFLFKCQP HNRLVFSIAR ASSLISLNSR PQNVRHTLTS VISLILSSVI VSAASLFMAP
THADDTELYV FEASARNGSR PQVLIIFDNS GSMSSLAYDV EAPYENKRAV NYAQSGNLFY
SRGSSENAAA PNPNSRREKR KFKGALNGCE SSWEYLNRYG TFTGFFREYG FSGSSGSWRE
FSELNGSSIS AVDCFEDIQE NKFGNAVGEA EGLPVDSLGT ASKPVRYTKA STSSSDSAKS
AAKAKAEKTA FGTGKVVTVY TEDYLNWLHG PKTKVNKTRL ALAKDAIESV ILTTPGVDFG
LAIFNMNGPY DGQRDGGRII SGIKPMSAAA KIDLLKGIND INYAQNTPLC ETLYEAYRYF
GGQSQYFGDD DSDYHYYDQW GRYQGTYQAK RNPFTDPEAL VVGTNNYNSP FKRCQNEAYI
IYITDGEPTL DNAADGLVEQ LTKGVGKHTS SPVSYLSALS GWMRNEDVNP NSAGKQTVRT
FTIGFSEGAA SAEHLLKQTA ENGGGKYFDA TDASKLRSSL QTALNNILEK NASFTSPSVA
SNNFNRTQTF DSAYYSMFLP NKGPRWLGNI KKFKVTSSGD VVDSKGNNAI GEDGNIKAEA
CSYWTSAEEC GASGDGNDVK RGGVLGAMQQ ASSRTLYSNL GTGLSPFTLS NASRKAGGDA
RLALYMGVDE TELSEHFDWA KGIDVDNDKN QDLSAASGAT PNWRADIMGD ALHSKPLALN
FGSEDQPDIR IIVGTNHGFL HMFKDEGDSV SETWGFIPYE LLPNFRDLKA NAPTGVHSVY
GIDGSPVAYT KMQGKRIEKA WVFVGMRRGG NAYYALDITS PDNPTFMWRI DASSPGMGEL
GQSWSTPVVT TIPSATGDKP VLIFGAGYTP ATKDGAEIGS DDSQGRGVFI VDAETGALIH
QFGGNGANTL LPGIANSIPS SVAVLDGNGD GRTDRIYATD TQGNVWRMDM PSANTSTWSG
FKFAALGDRS SVAGDRRFFS GPAVAQTMVT NTFELTQVVN GKSTKTVTKQ NIPYDAVVVG
SGHRAKPSDA SRSDMFFALQ DRNIVTQSFQ GKPNQKPVPS ALTLSDLYDV TTAAPNDKAS
EIAFGQKRGW YYNFSRKGEK SLSSATIVQG EVYFTSFVPG SDASVNQCLS SGKGYLYKKN
LHKGTNGYRT DFLYAGELVL DTPQLVIPPA AQPDAPNAKA PTPDMFLIGI GKAVPEEATC
ESGNPKCIGS GPKANKIYYY VDQ
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