Gene Shewana3_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1080 
Symbol 
ID4476415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1268257 
End bp1268769 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID639725623 
Producthypothetical protein 
Protein accessionYP_868721 
Protein GI117919529 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAACAG TCTTCCAGCT GATAGCCATA ACTTATCCCT TGAAAAAAAT CGCCCTATTT 
GTCGACGTGC AAAACATCTA CTACACCTGC CGTGAGGCCT ATCAGCGCCA GTTTAACTAT
CGCAAACTCT GGCAACAGTT AAGCGCGCAG GGTGAGATTG TCAGCGCCAT TGCCTATGCC
ATTCATCGCG GCGACGATGG CCAGTTAAAG TTTCAAGATG CGCTCAGACA TATTGGTTTT
GAGCTAAAGC TCAAGCCCTT TATTCAGCGC AGTGATGGTT CGGCGAAGGG GGATTGGGAT
GTGGGCATCA CCATAGATGT ACTGGAAATG GCGCCCGAGG TGGATACTGT AATACTGCTG
TCTGGCGATG GGGACTTTGC CCTCTTGCTC GATAAGATAA GGCAAAAATA CGCAATCGAG
GCCGAGGTGT ATGGCGTGCC CTCCCTCACG GCCAAATCCT TGATGGATGC TGCCACAAGG
TTTACACCAA TCACTCCCGA TTTGCTGCTC TAA
 
Protein sequence
MRTVFQLIAI TYPLKKIALF VDVQNIYYTC REAYQRQFNY RKLWQQLSAQ GEIVSAIAYA 
IHRGDDGQLK FQDALRHIGF ELKLKPFIQR SDGSAKGDWD VGITIDVLEM APEVDTVILL
SGDGDFALLL DKIRQKYAIE AEVYGVPSLT AKSLMDAATR FTPITPDLLL