| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1071 |
|---|
| Symbol | |
|---|
| ID | 4476406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1257026 |
|---|
| End bp | 1257439 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639725614 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_868712 |
|---|
| Protein GI | 117919520 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAT TTAGCCCAAG TTATTCTTTC CCTGTGCAAA TTTACTATGA AGATACCGAT
TTTTCTGGCG TGGTGTATCA CCCGAACTTT TTGAAATACT TCGAGCGCGC CCGTGAGCAT
GTGATTGGCG CCGAGCGCTT ACGCGACCTC TGGCAACAGC AGCAATTGGG TTTTGCGGTG
TATCGCAGCG ACATGTTGTG CCACGAAGGG GTGGAGTTTG CCGATATCAT CGATATCCGC
ACTAAGTTCT ACTTTGAGAG TAAATATCGC ACCGTCTGGC ATCAGGAAAT TTGGCGCCCA
AATGGTAAAA AACCCGCGGT CACCGCCACC ATTGAAATGG TGTGTATGAA TCAGGCGCGC
CAACTTGCGC CCATGCCCGC CGACTTAATC GCCCAATTAA GCCTAGGGAT GTAA
|
|---|
| Protein sequence | MPQFSPSYSF PVQIYYEDTD FSGVVYHPNF LKYFERAREH VIGAERLRDL WQQQQLGFAV
YRSDMLCHEG VEFADIIDIR TKFYFESKYR TVWHQEIWRP NGKKPAVTAT IEMVCMNQAR
QLAPMPADLI AQLSLGM
|
|---|
| |