Gene Shewana3_1069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1069 
Symbol 
ID4476615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1254566 
End bp1255405 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content48% 
IMG OID639725612 
Productputative signal transduction protein 
Protein accessionYP_868710 
Protein GI117919518 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTG AACATCTACT GTTAGTCGGA TTACTCAAAA AATTAAAAGA TGATGCTTTA 
GTGTTGCCAA CCCTGCCCGA AGTGGCCATG CGGGTGCAAG AAGTGGTGAG TCGCTCCGAT
GCGAGCCTAA AGCAAGTGGG TGAGGTGATA GGTCAAGACG CGGCGATTTC GGCGCGTATC
ATTAAAGTGG CCAACAGTGC CTTATATAGC CGCGGCATTC CCGCCGAGAG CATTAGTAGC
GCTGTGTCTC GCATTGGCCT CATCCAAATC AAGAGTATTG CGACCTCAGT GGCGATGGAG
CAGCTATTTA TTTCCACCAA TGAAATGGTA TGGGAAGTGA TGGATGAAGT GTGGCGCACC
TCGATTGAAG TAACGGCGGC CGCCTGTGCC ATGTTGCAAA TGTATAATAG ACGTCACCCT
GGGCAGCTCA ATTTAGATAC CTTAACACTG GCAGGTTTAG TCCATAATAT CGGTGCATTA
CCTGTATTGA CCGAAGCCGA AGCCCATCCA GAGTTATTCA CCAGTATTGA TCAATTGCGC
TCTTTAGTAC GTAAAATGCA AGGCCCATTA GGACGCGCAG TATTAAAGAG TTGGGATTTT
GCGCCAGAGG TGATGGAAGT GGTTGAGCGC TGGGCGGATT TACCTTATCT GCCAGACCAT
GTGACCTACT TAGATTTTAT CCGTGCCGCA GCCTTTTACA CCGGTGAGTT ACGTGCCGGA
GCCGATTTCG AGCAACGGAT GGAAGTCTTT GTGAGTCGTG GTTTACCCGT CTCGGCGAAT
GATTTAGCTA GTGACGAATT TATGGATAAA TTCCATTCAA TCAGAGAGAG TTACCAGTAG
 
Protein sequence
MSTEHLLLVG LLKKLKDDAL VLPTLPEVAM RVQEVVSRSD ASLKQVGEVI GQDAAISARI 
IKVANSALYS RGIPAESISS AVSRIGLIQI KSIATSVAME QLFISTNEMV WEVMDEVWRT
SIEVTAAACA MLQMYNRRHP GQLNLDTLTL AGLVHNIGAL PVLTEAEAHP ELFTSIDQLR
SLVRKMQGPL GRAVLKSWDF APEVMEVVER WADLPYLPDH VTYLDFIRAA AFYTGELRAG
ADFEQRMEVF VSRGLPVSAN DLASDEFMDK FHSIRESYQ