Gene Shewana3_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1068 
Symbol 
ID4476614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1252828 
End bp1254192 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content51% 
IMG OID639725611 
Productpeptidase U32 
Protein accessionYP_868709 
Protein GI117919517 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAAC CTGAGTTGTT ATCTCCCGCT GGGACGCTGA AAAACATGCG TTACGCTTTT 
GCCTATGGTG CAGATGCCGT GTATGCCGGT CAGCCGAGAT ACAGCCTGAG GGTTCGTAAT
AACGACTTCA AAATGGAAAA CCTCGCAACG GGTATCGAAG AAGCCCATGC GCTGGGTAAA
AAGCTTTATG TGGTGAGTAA CATTGCTCCC CACAACGCCA AGCTCAAAAC CTATATCAAA
GATATGGAAC CGGTAGTGGC GATGAAGCCC GATGCGCTGA TCATGTCAGA TCCAGGCCTT
ATCATGATGG TGCGTGAGGC CTTCCCTGAG CAGGTAGTGC ATTTATCGGT GCAAGCCAAC
GCCATTAACT GGGCGTCGGT CAAATTCTGG CAGACTCAAG GCATTAAACG GGTGATTTTA
TCCCGCGAAT TGTCCTTAGA TGAAATTGAA GAAATCCGTC AACGCTGCCC CGATATCGAG
CTAGAAGTGT TTGTCCACGG CGCCCTGTGT ATGGCTTACT CTGGCCGTTG TTTGCTGTCG
GGTTATATCA ATAAGCGCGA TCCAAACCAA GGCACTTGCA CTAACGCTTG CCGCTGGAAA
TACGATGTGC ACGAAGCGCA GCAAACTGAC TCTGGCGATA TCATTGCCAC CCCCAATGCG
GTGCAAATCG AGACGCCAAC CTTAGGCACG GGTCCTGCGA CCGACCAAAT CTTCCTGCTT
CAAGAGGCCA ATCGCCCCGG CGAATACATG CCAGCGTTTG AAGATGAGCA TGGCACTTAT
ATCATGAACT CTAAGGACTT GCGTGCAATC CAACACGTTG AGCGTTTGGC GAAAATGGGC
ATCGACTCGC TGAAGATCGA AGGCCGTACT AAGTCGTTTT ACTATGTGGC CCGTACCGCC
CAGCTATACC GTCAGGCCAT CGACGATGCC GCCTCAGGCA AGAGCTTCGA TCGCAGCTTG
ATGAACCAAC TCGAAGGCTT AGCCCACCGC GGCTATACGG AAGGTTTCTT ACGTCGCCAC
GTACATGATG AATATCAAAA CTACGACTAT GGTTACTCGG TCAGCGATAC CCAACAATTT
GTGGGTGAAT TAACCGGTAA ACGCAATCTG GCTGGCCTTG CCGAAATCGA AGTGAAGAAC
AAATTCTCTG TCGGTGATAG TGTTGAATTA ATGACGCCAC AGGGCAATAT CAGCCTCACC
ATCGAGCAAC TCGAAAACCG CAAAGCCGAA TCGGTTGAAG CGGGATTAGG TTCGGGCCAT
ACCGTTTACT TGCCCGTCCC GAAAGAGGTT GATCTGCACC ACGGCATTTT ACTGCGTAAC
CTGCCCCAAG GTCAGGATAC CCGCAACCCA CACGAAGCAG GCTAA
 
Protein sequence
MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKMENLAT GIEEAHALGK 
KLYVVSNIAP HNAKLKTYIK DMEPVVAMKP DALIMSDPGL IMMVREAFPE QVVHLSVQAN
AINWASVKFW QTQGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWK YDVHEAQQTD SGDIIATPNA VQIETPTLGT GPATDQIFLL
QEANRPGEYM PAFEDEHGTY IMNSKDLRAI QHVERLAKMG IDSLKIEGRT KSFYYVARTA
QLYRQAIDDA ASGKSFDRSL MNQLEGLAHR GYTEGFLRRH VHDEYQNYDY GYSVSDTQQF
VGELTGKRNL AGLAEIEVKN KFSVGDSVEL MTPQGNISLT IEQLENRKAE SVEAGLGSGH
TVYLPVPKEV DLHHGILLRN LPQGQDTRNP HEAG