| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1055 |
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| Symbol | |
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| ID | 4476601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1236182 |
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| End bp | 1238671 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725598 |
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| Product | trimethylamine-N-oxide reductase TorA |
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| Protein accession | YP_868696 |
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| Protein GI | 117919504 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02164] trimethylamine-N-oxide reductase TorA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA GAGACTTTTT AAAAGGCTTA GCCTCAACCT CTTTCGTTGC TTTAGGTGGC
AGCTCAGTGT TAGCGCCCTT AAACGCGCTG GCCAGCACGG GCTTAAATGA AGACGAATGG
CTGACCACGG GCTCGCACTT CGGCGCCTTT AAAATCAAAC GTAAAAACGG TGTGATTGCC
GAGGTCAAAG CTTTCGATTT AGATAAATAT CCAACGGACA TGATTAACGG TATCCGCGGC
ATGGTCTACA ACCCATCTCG CGTGCGTTAC CCTATGGTTC GCTTAGACTT TTTACTTAAA
GGCCATAAGA GCAATACCCA GCAACGGGGG GATTTCCGCT TCGTTCGCGT GACCTGGGAT
AAAGCATTAA AACTGTTTAA ACACTCACTT GATGAAGTCC AAACCAAGTA CGGTCCATCG
GGCTTACACG CGGGCCAAAC CGGTTGGCGC GCAACGGGGC AACTGCATTC CAGCACCAGC
CATATGCAGC GTGCGGTAGG AATGCACGGC AACTATGTGA AGAAAATCGG TGACTACTCC
ACCGGGGCCG GCCAAACCAT TCTGCCCTAT GTGTTAGGTT CAACCGAAGT GTATGCCCAA
GGCACCTCTT GGCCGCTGAT CTTAGAAAAC AGCAACACTA TCGTGCTCTG GTCGAACGAT
CCTTACAAAA ACCTGCAAGT GGGTTGGAAC GCCGAAACCC ATGAGGCCTT CGCTTACCTC
GCGCAGCTAA AAGAGAAGGT CAAACAGGGT AAGATCCGCG TGATCAGTAT CGACCCTGTG
GTCACCAAAA CCCAGGCTTA CCTTGGCTGT GAACAGTTAT ATGTGAACCC ACAGACTGAC
GTGACGCTGA TGCTGGCCAT CGCCCATGAG ATGATCACCC AAAAACTTTA CGATGATAAA
TTCATCCAAG GCTACAGCTT AGGCTTTGAA GAGTTTGTGC CTTACGTGAT GGGCACTAAA
GATGGTATCG CTAAAACTCC AGAGTGGGCG GCGCCAATCT GTGGGGTTGA GCCACACATC
ATCCGCGATC TGGCGAAAAC CTTAGTGAAG GGCCGCACCC AAATCATGAT GGGTTGGTGT
ATTCAACGCC AACAACACGG TGAACAACCT TACTGGATGG CCGCGGTGCT CGCGACCATG
ATAGGCCAAA TTGGTTTGCC CGGCGGCGGC ATCAGCTATG GTCACCACTA CTCCAGTATT
GGTGTGCCTG CGACAAATGC GGCGGCGCCC GGCGCCTTCC CGCGTAACTT AGACGAGAAC
CAAAAACCCC TGTTCGATAG CACCGACTTT AAAGGCGCGA GCAGCACCAT TCCCGTCGCC
CGTTGGATTG ATGCGATTCT CGAACCCGGC AAAACCATTG ATGCCAACGG TTCGAAAGTC
GTGTATCCCG ATATTAAGAT GATGATTTTC TCGGGTAATA ACCCATGGAA CCACCATCAA
GACCGTAACC GCATGAAGCA AGCCTTCCAT AAGCTGGAAT GCGTGGTCAC TATCGATGTG
AACTGGACGG CGACGTGCCG CTTCTCCGAC ATAGTGCTGC CCGCCTGCAC CACCTATGAG
CGCAACGATA TCGACGTATA CGGCGCCTAT GCTAACCGCG GTATTTTGGC GATGCAGAAG
ATGGTCGAGC CGCTATTTGA GAGCTTATCA GACTTTGAGA TCTTTACTCG CTTTGCCGCA
CTGATGGGTA AAGAGAAAGA ATACACCCGC AATATGAGCG AAATGGAGTG GATAGAAACC
CTCTATAACG AGTGTAAAGC CGCGAACGCG GGTAAATATG AGATGCCAGA TTTTGCCACC
TTCTGGAAGC AAGGTTATGT GCACTTTGGC GATGGCGAGC TGTGGACACG CCATGCCGAC
TTTAGAAACG ATCCGGAAAT CAATCCATTA GGTACGCCTT CTGGCTTGAT TGAAATCTTC
AGCCGTAAGA TTGAACAGTT CGGTTATGAC GACTGCCAAG GCCACCCAAT TTGGATGGAA
AAAGCCGAGC GTAGCCATGG TGGCCCGGGT TCAGACAAAT ATCCTGTGTG GCTACAATCT
TGCCATCCGG ATAAACGTCT GCACTCACAG ATGTGTGAGT CGAAGGAATA CCGCGAAACC
TACACAGTCA ACGGCCGCGA ACCCATCTAT ATCAGCCCTG TGGATGCCAA AGCGCGCGGC
ATTAAAGATG GCGATATAGT GCGCGTCTTT AACGACCGTG GCCAACTGTT AGCGGGCGCC
ATGGTATCGG ATCGCTTCCC TAAAGGTGTA GTGCGAATTC ATGAAGGCGC ATGGTATGGC
CCAGTGGGTA AAGATGGCAG CGTCGAAGGC GGCGCCGAAA TCGGTGCCCT GTGCAGCTAT
GGTGACCCGA ATACTCTGAC CTTAGACATT GGCACCTCGA AGTTGGCGCA AGCCTGCTCA
GCCTATACTT GTCTGGTCGA GTTTGAGAAA TACCAAGGCA AAGTCCCTAA GGTCAGCTCC
TTCGATGGTC CTATCGAAGT CGAAATCTAA
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| Protein sequence | MNRRDFLKGL ASTSFVALGG SSVLAPLNAL ASTGLNEDEW LTTGSHFGAF KIKRKNGVIA
EVKAFDLDKY PTDMINGIRG MVYNPSRVRY PMVRLDFLLK GHKSNTQQRG DFRFVRVTWD
KALKLFKHSL DEVQTKYGPS GLHAGQTGWR ATGQLHSSTS HMQRAVGMHG NYVKKIGDYS
TGAGQTILPY VLGSTEVYAQ GTSWPLILEN SNTIVLWSND PYKNLQVGWN AETHEAFAYL
AQLKEKVKQG KIRVISIDPV VTKTQAYLGC EQLYVNPQTD VTLMLAIAHE MITQKLYDDK
FIQGYSLGFE EFVPYVMGTK DGIAKTPEWA APICGVEPHI IRDLAKTLVK GRTQIMMGWC
IQRQQHGEQP YWMAAVLATM IGQIGLPGGG ISYGHHYSSI GVPATNAAAP GAFPRNLDEN
QKPLFDSTDF KGASSTIPVA RWIDAILEPG KTIDANGSKV VYPDIKMMIF SGNNPWNHHQ
DRNRMKQAFH KLECVVTIDV NWTATCRFSD IVLPACTTYE RNDIDVYGAY ANRGILAMQK
MVEPLFESLS DFEIFTRFAA LMGKEKEYTR NMSEMEWIET LYNECKAANA GKYEMPDFAT
FWKQGYVHFG DGELWTRHAD FRNDPEINPL GTPSGLIEIF SRKIEQFGYD DCQGHPIWME
KAERSHGGPG SDKYPVWLQS CHPDKRLHSQ MCESKEYRET YTVNGREPIY ISPVDAKARG
IKDGDIVRVF NDRGQLLAGA MVSDRFPKGV VRIHEGAWYG PVGKDGSVEG GAEIGALCSY
GDPNTLTLDI GTSKLAQACS AYTCLVEFEK YQGKVPKVSS FDGPIEVEI
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