| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1052 |
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| Symbol | |
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| ID | 4479397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1231087 |
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| End bp | 1232154 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725595 |
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| Product | TMAO reductase system periplasmic protein TorT |
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| Protein accession | YP_868693 |
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| Protein GI | 117919501 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02955] TMAO reductase system periplasmic protein TorT |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.61821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAT TTTGGCAAGC TTTGCTCACA CTCACCACTT TTGGCCTGTT ATGTTTATCG
TCTGCCAATG CCAACAGCCA AACTTGGCCA TTAGAGCAAC GCCATCCCTT TAATGCCAAA
ATTCAACAGG CGCAGGCACT TGATTATCAT CCTCTGAGTA AAGCACAACA GGCTTGGCGC
ATTTGTGCCT TAGTGCCTCA TCTTAAGGAC GCCTATTGGA TTGGCATCGA CTACGGCCTG
ATCCAACAGG CGAAACACCT CGGTGTGTCG CTGGATCTGT TCGAAGCGGG CAGCTACTAC
CATCAAGATA AACAGCTCGA GCAATTAAGC GCATGTATGA AGGGAGATTA CGATGCAATT
TTGCTCGGCG CCGTGAGCCC CAATCTGCTC GAACATTTCT CAGAGCCGTT AACCAAACCT
GTGCTTGCCC TAGTGAATAA ACTCAATGCT GAGCAAGTGC AGACCCATAT CGGCGTTAAC
TGGTATCAAA TGGGGCTAAG CGCGGGCAAT TTTATTAAGG CAGATGCCAA GGCGCATTCC
CCAACCCAGC CGACCACCTT GGCCCTCTTA GCGGGTCCCG AAAACCTAGG TGGCACAGAT
TTAGTCGAAC AAGGCATTCG CCATGCCCTT GAGGGCAGCA ATGTCAGCAT CAGTGCGATT
CAGCATGCCG ATAACAATCG CAATCTCTAC CGCGATCAAT TACAGATACT GCTTAAAGCC
CAGCGCCCCA ACTATATTCT TGGCAGTGCG GTGGCGATAG AAGCCGCCGT CAGCACCCTC
AAACAAAAAC AGCTGACGCA AGACATCAAG CTGGTGAGCA GTTACTTATC CCCCGCGATT
CTGCGCGGCT TGAAGCGACA AAAAGTGGTC TACAGCAATG ATGACTTGGT CGTGTTACAG
GGCAAACTCG CCATCGATGT CACGGTAAAA CAACTCGAAG GCGCCGCACC TTTTGGCGAT
ATAGGTCCTG CTATCGTTGA GCGCACGACT TCACCAAATA CCCTATCGGA TCTTAACGTT
AGCCTCGCCG AAGCGGATTT TTATCCCTTG TATCAAGTGC GCCCCTGA
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| Protein sequence | MGKFWQALLT LTTFGLLCLS SANANSQTWP LEQRHPFNAK IQQAQALDYH PLSKAQQAWR
ICALVPHLKD AYWIGIDYGL IQQAKHLGVS LDLFEAGSYY HQDKQLEQLS ACMKGDYDAI
LLGAVSPNLL EHFSEPLTKP VLALVNKLNA EQVQTHIGVN WYQMGLSAGN FIKADAKAHS
PTQPTTLALL AGPENLGGTD LVEQGIRHAL EGSNVSISAI QHADNNRNLY RDQLQILLKA
QRPNYILGSA VAIEAAVSTL KQKQLTQDIK LVSSYLSPAI LRGLKRQKVV YSNDDLVVLQ
GKLAIDVTVK QLEGAAPFGD IGPAIVERTT SPNTLSDLNV SLAEADFYPL YQVRP
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