Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1047 |
Symbol | |
ID | 4479392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1224809 |
End bp | 1225810 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639725590 |
Product | hypothetical protein |
Protein accession | YP_868688 |
Protein GI | 117919496 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00162551 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTACC AGCGACTGAC TTTGACTTCC CCTGCATCCC AACACTCGGC GCCAACGCCT GCACAAACTT CCTTCTATAT TCCGTACCGA GATGGACAGC TGCATCTGCG TCAGTTGTTG CCTGCCAATG CGGATTTTTC GAAGCCACCG ATCCTTATGT TGCATGGTGC CATGTCCAAT GGCCGGGTAT TTTACAGCCA AAGTGGTCGA GGCTTAGGAT GTTTTCTCGC TCAGGCGGGC TTTGTGGTTT ATGTGCTGGA TACGGCGGGC AGGGGTATGA GTCTGCCCAA AATTGCGCGT GGCTTTACTC TGGGGCAAGG GGAGGTGATC CGCGAGCAGC TGCCATTAGT GCAGCAGTCT ATTTTGACTA TGCATCAACA GCTTTGCCAA GAACAGGGAA AGCCTGCACC ATCGCAGCTG CATTGGTGTG CGCATTCTTG GGGCGGCGTG TTGATGGCAA GCGCCTTAGC GCGTTATCCC GAATTGCAGC AGAGTGTGCG GTCGCTGCTG ACCTTTGGCA GTAAACGCAC GATTCGAGTG AAGTCCTTTA AAAAATGGTT GATGGTCGAT GTGTTTTGGA ATCGCCTCGC CCCAAGTTTA GCCGTGGGGC AGGGGTATCT CGCCGCCGAT AAGCTGCGTG TCGGTATGGA TAACGAGAGC CGCGCCTCGT TAACTCAAAG CATAGATTGG GTGCGTGGAG AGTGGCTCGA CCATGATGAT GGCTTCGATT ATGGCAAGGC GGCGAAGGCG GCTAACTGGC CCATCGCGTG GTTTATTGCT GGGCAAAACG ATACTGTGCT CGGGCATCCC GAAGATGTCG CCGATATGAT CTCTGAGTGT GGTTTTCGCC AAGTGAAATA CACTCTGCTC TCAAAGGCGA ACGGCTTTAA ACACGACTAT GGTCATGCGG ATATGCTGAC CCATCTGGAT GCGATGGGTG ACCATTTTCC GCTGATCCGC GATTGGTATC TCGGGTTTGA ATTGGCAGTG TTAAAAGACT AG
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Protein sequence | MDYQRLTLTS PASQHSAPTP AQTSFYIPYR DGQLHLRQLL PANADFSKPP ILMLHGAMSN GRVFYSQSGR GLGCFLAQAG FVVYVLDTAG RGMSLPKIAR GFTLGQGEVI REQLPLVQQS ILTMHQQLCQ EQGKPAPSQL HWCAHSWGGV LMASALARYP ELQQSVRSLL TFGSKRTIRV KSFKKWLMVD VFWNRLAPSL AVGQGYLAAD KLRVGMDNES RASLTQSIDW VRGEWLDHDD GFDYGKAAKA ANWPIAWFIA GQNDTVLGHP EDVADMISEC GFRQVKYTLL SKANGFKHDY GHADMLTHLD AMGDHFPLIR DWYLGFELAV LKD
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