Gene Shewana3_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1047 
Symbol 
ID4479392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1224809 
End bp1225810 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content53% 
IMG OID639725590 
Producthypothetical protein 
Protein accessionYP_868688 
Protein GI117919496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00162551 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTACC AGCGACTGAC TTTGACTTCC CCTGCATCCC AACACTCGGC GCCAACGCCT 
GCACAAACTT CCTTCTATAT TCCGTACCGA GATGGACAGC TGCATCTGCG TCAGTTGTTG
CCTGCCAATG CGGATTTTTC GAAGCCACCG ATCCTTATGT TGCATGGTGC CATGTCCAAT
GGCCGGGTAT TTTACAGCCA AAGTGGTCGA GGCTTAGGAT GTTTTCTCGC TCAGGCGGGC
TTTGTGGTTT ATGTGCTGGA TACGGCGGGC AGGGGTATGA GTCTGCCCAA AATTGCGCGT
GGCTTTACTC TGGGGCAAGG GGAGGTGATC CGCGAGCAGC TGCCATTAGT GCAGCAGTCT
ATTTTGACTA TGCATCAACA GCTTTGCCAA GAACAGGGAA AGCCTGCACC ATCGCAGCTG
CATTGGTGTG CGCATTCTTG GGGCGGCGTG TTGATGGCAA GCGCCTTAGC GCGTTATCCC
GAATTGCAGC AGAGTGTGCG GTCGCTGCTG ACCTTTGGCA GTAAACGCAC GATTCGAGTG
AAGTCCTTTA AAAAATGGTT GATGGTCGAT GTGTTTTGGA ATCGCCTCGC CCCAAGTTTA
GCCGTGGGGC AGGGGTATCT CGCCGCCGAT AAGCTGCGTG TCGGTATGGA TAACGAGAGC
CGCGCCTCGT TAACTCAAAG CATAGATTGG GTGCGTGGAG AGTGGCTCGA CCATGATGAT
GGCTTCGATT ATGGCAAGGC GGCGAAGGCG GCTAACTGGC CCATCGCGTG GTTTATTGCT
GGGCAAAACG ATACTGTGCT CGGGCATCCC GAAGATGTCG CCGATATGAT CTCTGAGTGT
GGTTTTCGCC AAGTGAAATA CACTCTGCTC TCAAAGGCGA ACGGCTTTAA ACACGACTAT
GGTCATGCGG ATATGCTGAC CCATCTGGAT GCGATGGGTG ACCATTTTCC GCTGATCCGC
GATTGGTATC TCGGGTTTGA ATTGGCAGTG TTAAAAGACT AG
 
Protein sequence
MDYQRLTLTS PASQHSAPTP AQTSFYIPYR DGQLHLRQLL PANADFSKPP ILMLHGAMSN 
GRVFYSQSGR GLGCFLAQAG FVVYVLDTAG RGMSLPKIAR GFTLGQGEVI REQLPLVQQS
ILTMHQQLCQ EQGKPAPSQL HWCAHSWGGV LMASALARYP ELQQSVRSLL TFGSKRTIRV
KSFKKWLMVD VFWNRLAPSL AVGQGYLAAD KLRVGMDNES RASLTQSIDW VRGEWLDHDD
GFDYGKAAKA ANWPIAWFIA GQNDTVLGHP EDVADMISEC GFRQVKYTLL SKANGFKHDY
GHADMLTHLD AMGDHFPLIR DWYLGFELAV LKD