| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1040 |
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| Symbol | |
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| ID | 4479385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1216736 |
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| End bp | 1217575 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639725583 |
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| Product | nucleoside-specific channel-forming protein, Tsx |
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| Protein accession | YP_868681 |
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| Protein GI | 117919489 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000125932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000727651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCT GCTACAGCAG TAGCTGCAAT GTCTGGTAAC
GCATTTGCTG CAGACCGTTC AGACCTTCAC GGTTCTGACT ACAAGTGGAT GCAGTTCAAC
GCTATGTACT CTATCGGCGA AAAGCCTGAT AACCCAGCTT CTGGCGACCA ACACAACTAC
TTAGAAATGG AGTTCGGCGG CCGTTCTGGT ATTTTCGATC TGTATGGTTA TGTTGACGTA
TTCAACTTAG CAAACGAGAA CACCAAAGAC GGTGACAAGA ACCCAGGTTC AGGCACCAGC
AAACTGTTCA TGAAATTTGC TCCACGTGTT TCTATCGATG CATTAACTGG TAAAGATTTA
TCTTTCGGTC CAGTACAAGA AGTTTACTTC TCTACTCTGT TCAACTGGGA CGGTCTGAAC
GGTGAAGGCG TTAACTCTAC TTTCTGGGGT GTTGGTGCTG ACGTAAACGT GCCTTGGTTA
GGCAAAACAG GTATGAACCT GTACGGTTAT TACGACATGA ACGCGAAAGA GTGGAACGGT
TACCAATTCT CTGCTAACTG GTTCAAGCCT TTCTACTTCT TCGACAACAA GAGCTTCCTG
TCATTCCAAG GTTACATCGA TTACCAATTC GGTGCTGACG AAGACAAGAC TGCTTTCGTA
CCAAAAACCT CTAACGGTGG TAACATCTTC TTCGGTCTAT ACTGGCACTC AGATCGTTAC
GCTCTGGGCT ATGGCTTGAA AGGCTTCAAA GACGTTTACC TGTTAGAAGA CGGTGCTGGT
GCACTGGCTC TAGAATCAAC AGGTTGGTCT CACTACCTGT CAGCTACTTA CAAGTTCTAA
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| Protein sequence | MKNVKTLALA ATAVAAMSGN AFAADRSDLH GSDYKWMQFN AMYSIGEKPD NPASGDQHNY
LEMEFGGRSG IFDLYGYVDV FNLANENTKD GDKNPGSGTS KLFMKFAPRV SIDALTGKDL
SFGPVQEVYF STLFNWDGLN GEGVNSTFWG VGADVNVPWL GKTGMNLYGY YDMNAKEWNG
YQFSANWFKP FYFFDNKSFL SFQGYIDYQF GADEDKTAFV PKTSNGGNIF FGLYWHSDRY
ALGYGLKGFK DVYLLEDGAG ALALESTGWS HYLSATYKF
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