| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1038 |
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| Symbol | |
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| ID | 4479383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1214197 |
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| End bp | 1214964 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639725581 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_868679 |
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| Protein GI | 117919487 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000100963 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000956605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATGCTAG ATACCCACGC ACACCTCGAT TTCGCAGAGT TTGATAGTGA CCGCGAACAG
GTCGTGCAGC GTATGCGACA AGCGGGCATC GATAATCTGA TTATTCCGGG AGTTTCCCCG
CTGCATTGGG AAAAGCAGTT GGCGATTGCA GAGCAATATC AATGTTATTT TGCCTTAGGT
ATCCATCCTT GGTTTTGCCC CGAAGATGTT GATAAGGCTA TTTCTGCATT AACATTTCAA
GTTTCTCAGT TACGAGAATG TCCCCGTTTT GTTGCTATTG GTGAATGCGG ATTAGACAAA
CTTTATGCTG ATAATTGGAG TAAACAGTTA GCATTTTTCG ATGCGCAGCT AACTCTCGCC
AATGAGCTGA ACTTGCCCGT TATCGTCCAT GCAGTCAAAG CTCATCAAGA GGTATTGTCC
CATTTAAAGC GCCACAAACT CCCAAAAGGT GGCGTAATAC ACGCCTTTTC TGGCAGTCCC
GATATAGCTG CTGAATATAT TAAGTTGGGT TTTAAGCTAG GTATTGGGGG CTTAGTGATG
AATCCCAATG CGAAAAAACT GCTCAAAACC GTCAGCGAAT TGCCCCTAGA CAGCTTCCTA
CTTGAGACTG ATTCTCCAGC CATGACCCCG CAAAATGTTA CAGAAAAACG GAATCAACCC
GCTAACGCTG TACTTTTTAT AGACAAAATT GCAACTTTGC AAAAAAAATC TAGTGTTCTA
ATATCAGAAC ACTTGGTGTC GAATGCAATG CAACTGTTTG ACCTTTAG
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| Protein sequence | MMLDTHAHLD FAEFDSDREQ VVQRMRQAGI DNLIIPGVSP LHWEKQLAIA EQYQCYFALG
IHPWFCPEDV DKAISALTFQ VSQLRECPRF VAIGECGLDK LYADNWSKQL AFFDAQLTLA
NELNLPVIVH AVKAHQEVLS HLKRHKLPKG GVIHAFSGSP DIAAEYIKLG FKLGIGGLVM
NPNAKKLLKT VSELPLDSFL LETDSPAMTP QNVTEKRNQP ANAVLFIDKI ATLQKKSSVL
ISEHLVSNAM QLFDL
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