| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1023 |
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| Symbol | |
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| ID | 4479366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1194088 |
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| End bp | 1196061 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725564 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_868664 |
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| Protein GI | 117919472 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000161981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000832625 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC
GTCGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG
GATTATTCTA CTTTCCTAGA CAATGTTCGT GATGGACAAG TCGCTAGTGT TGAAGTGAAA
AGTGACCAAC GTACTATCGA AGGTTCTAAG CGCACGGGCG AAAAATTCAC GACCATCATG
CCACTGTATG ACCAAGATTT AATTAATGAT CTTGACCGTA AAGGCATCAC CATGAAAGGC
CAAGAAGCCG AAGAATCGGG TTTCTTAACC CAGATCTTTA TTTCTTGGTT CCCAATGTTG
CTGCTGATTG GGGTATGGAT TTTCTTTATG CGCCAGATGC AGGGCGGCGG TGGCAAAGGC
GCTATGTCCT TTGGCAAGAG CAAAGCCAAG CTGATGAGCG AAGATCAAAT CAAGACCACT
TTTGCTGACG TTGCTGGCTG TGATGAAGCC AAAGAAGAAG TGAAAGAACT GGTCGATTAT
CTGCGTGATC CAACCAAATT CCAAAAACTG GGTGGTCGTA TTCCAACGGG CGTGCTCATG
GTTGGCCCAC CAGGTACAGG TAAAACCTTA CTGGCTAAAG CGATTGCGGG CGAGTCAAAG
GTACCTTTCT TTACCATTTC AGGTTCTGAC TTCGTAGAAA TGTTCGTCGG TGTCGGTGCA
TCTCGTGTGC GTGACATGTT CGAACAGGCG AAAAAATCAG CCCCTTGTAT TATCTTCATC
GACGAAATCG ATGCCGTAGG TCGCCAGCGT GGCGCAGGCT TAGGTGGTGG TCACGATGAA
CGTGAGCAAA CCCTTAACCA AATGCTGGTT GAGATGGACG GCTTCGAAGG TAACGAAGGG
ATTATCGTAA TTGCGGCGAC CAACCGCCCT GACGTATTGG ACTCTGCGCT GCTGCGTCCA
GGTCGTTTCG ACCGTCAAGT GGTTGTGGGT CTACCGGACG TTCGCGGTCG TGAGCAAATC
CTTAAAGTGC ATATGCGTAA AGTGCCACTT TCTGAAGATG TGAAAGCAAG CGTAATTGCC
CGCGGTACTC CAGGTTTCTC CGGTGCCGAT TTAGCCAACT TAGTTAACGA AGCGGCACTG
TTTGCGGCGC GCGGTAACCG CCGTGTTGTC GGTATGGAAG AATTCGAGCG TGCAAAAGAC
AAGATCATGA TGGGGGCTGA GCGCCGCTCT ATGGTGATGT CGGAAGCTGA AAAAGAAATG
ACAGCATACC ACGAAGCGGG TCACGCGATT GTGGGCTGTT TAGTGCCAGA GCATGACCCT
GTGCACAAGG TAACCATCAT CCCGCGTGGT CGTGCGCTGG GTGTGACCTT CTTCTTACCT
GAGGCCGATG CGATTAGCCA AAGCCGTCGT AAGTTAGAGA GCCAGATTTC GGTTGCCTAC
GGTGGTCGAT TAGCCGAAGA GCTGATCTAC GGTAGCGAAA AAGTGTCTAC AGGCGCTTCA
CAAGACATTA AATATGCGAC GTCGATTGCC CGTAATATGG TGACCCAATG GGGCTTCTCT
GAAAAACTCG GCCCACTGCT TTATGCAGAG GAAGAGGGCG AAGTGTTCTT AGGTCGTAGC
ATGGGTAAAG CCAAGGCAAT GTCCGACGAA ACCGCGACGG TTATCGATGC CGAGGTGAAA
GCCTTTATCG ATAAAAACTA TGGCCGTGCT AAGCAAATCC TGCTGGATAA CATCGATATT
CTACATTCGA TGAAAGACGC GCTGATGAAG TATGAAACCA TTGATTCACT GCAAATTGAC
GATTTAATGA ACCGTCGTGA AGTGCGTCAG CCTGCCGATT GGCAAGCGGA TGACAATGGT
TCAAATGACA AAGGCAATGG CAAAGGTGAA CCTGCCGTTA AAGTCGACGA AGTGGTAAAA
ACTGCTCCCG TTGAGGCAGA GCTGAAAGAT GCCGATGAGT CACCCGTTAA GTAG
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| Protein sequence | MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVASVEVK
SDQRTIEGSK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML
LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY
LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA
SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG
IIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA
RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM
TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADAISQSRR KLESQISVAY
GGRLAEELIY GSEKVSTGAS QDIKYATSIA RNMVTQWGFS EKLGPLLYAE EEGEVFLGRS
MGKAKAMSDE TATVIDAEVK AFIDKNYGRA KQILLDNIDI LHSMKDALMK YETIDSLQID
DLMNRREVRQ PADWQADDNG SNDKGNGKGE PAVKVDEVVK TAPVEAELKD ADESPVK
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