| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1022 |
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| Symbol | rrmJ |
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| ID | 4479365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1193429 |
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| End bp | 1194058 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725563 |
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| Product | 23S rRNA methyltransferase J |
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| Protein accession | YP_868663 |
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| Protein GI | 117919471 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000196508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000167286 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGGTA AAAAACGTAC GGCCAGTTCC ACCCGTTGGA TGCAGGAACA CTTTGATGAT
CATTATGTCA AACTAGCACA GAAACGGGGA TTGCGTTCTC GCGCTGCGTT CAAGCTTGAG
GAGCTCCAGG AGAAGGACCA ATTGATCCGC CCTGGAATGA CTGTGGTGGA CTTAGGTGCG
GCTCCTGGTG GTTGGTCTCA AATAGCCGTC AAGCTGACCG GAGATAAAGG TAAAGTGATC
GCCTGTGATA TTTTGCCAAT GGATCCTATT GTCGGCGTGG ATTTCTTGCA AGGGGACTTT
CGTGAAGAGA AAGTGCTCGA AGCATTGCTA ACTCGCGTCG GTGCGGATAA GGTTGACGTT
GTATTATCTG ATATGGCGCC CAACATGAGT GGTTCCGATG GTGTCGATCA GCCGCGCGCC
ATGTATTTAG TCGAACTGGC GTTAGATATG TGTCATCAAG TATTGGCACC TAACGGCAGT
TTTGCGGTCA AAGTCTTTCA GGGGGAGGGA TTTGACGAAT ATATGAAGGC GGTAAAAGAC
GCATTCAAAG TAGTAAAAAC ACGTAAACCG GACTCGTCGC GGGCACGCTC CCGTGAAGTC
TATCTTGTGG CGACAGGGTA CAAGTTGTAG
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| Protein sequence | MSGKKRTASS TRWMQEHFDD HYVKLAQKRG LRSRAAFKLE ELQEKDQLIR PGMTVVDLGA
APGGWSQIAV KLTGDKGKVI ACDILPMDPI VGVDFLQGDF REEKVLEALL TRVGADKVDV
VLSDMAPNMS GSDGVDQPRA MYLVELALDM CHQVLAPNGS FAVKVFQGEG FDEYMKAVKD
AFKVVKTRKP DSSRARSREV YLVATGYKL
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