Gene Shewana3_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1021 
Symbol 
ID4479364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1193039 
End bp1193338 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content41% 
IMG OID639725562 
Producthypothetical protein 
Protein accessionYP_868662 
Protein GI117919470 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000882281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000146985 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTAA CAACCAAACA AAAACAGCAT TTAAAAGGTC TGGCGCACAA TTTAAAGCCA 
GTGGTGCTGC TTGGTGCCAA TGGATTGACT GAAGGTGTAC TCGCTGAAAT TGAAAGCGCA
CTCGCTTATC ATGAACTGAT TAAAGTGAAA GTAGCCTCTA CCGATAGAGA GCTAAAAAAT
GCCATCGTTG ATGCCATAGT ACGTGAAACT CAATCTGCAA AAGTGCAACT TATTGGTCAT
ATTCTGGTGA TTTATCGTCA ATCGCCTGAA ATGAAAATTG CCCTGCCAAG AGCTAAGTAA
 
Protein sequence
MNLTTKQKQH LKGLAHNLKP VVLLGANGLT EGVLAEIESA LAYHELIKVK VASTDRELKN 
AIVDAIVRET QSAKVQLIGH ILVIYRQSPE MKIALPRAK