| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1020 |
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| Symbol | secF |
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| ID | 4479363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1192097 |
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| End bp | 1192981 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725561 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_868661 |
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| Protein GI | 117919469 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00412183 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000205706 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAATA TCAATCTGAC TAAATGGCGT TATGTATCGA GCGCTATCTC TATCTTTTTA
ATGCTGGCCT CACTCACCAT CATCGGGATG AAAGGCTTTA ACTGGGGCTT AGACTTTACT
GGCGGTGTGG TGACTGAGGT TCAGCTCGAC AGGCGTATCA CCAGCAGCGA GTTGCAACCC
TTATTGAACG CGGCTTATCA GCAAGAGGTG ACGGTGATTT CGGCCAGTGA GCCTGGGCGT
TGGGTATTAC GCTATGCGGA CACTGCACAA AGTAATGTTG ATATTGCGCA AACCTTAGCG
CCACTGGGTG AGGTGCAAGT ACTGAACACC AGTATTGTCG GCCCGCAAGT GGGTAAAGAG
TTAGCCGAGC AGGGCGGTCT TGCCCTGTTG GTGGCCATGC TGTGTATCTT AGGGTATTTG
AGTTATCGCT TCGAATGGCG TCTCGCCTCC GGCGCGTTAT TTGCGCTGGT GCACGACGTG
ATTTTTGTGC TCGCCTTTTT CTCATTAACC CAGATGGAGT TTAATTTAAC TGTACTCGCT
GCAGTGCTGG CGATTTTAGG TTATTCACTC AACGATTCGA TCATTATCGC CGACCGGATT
CGGGAGTTAT TGATTGCTAA GCCAAAGCTT GCTATTCAGG AGATTAATAA CCAAGCGATT
GTCGCGACAT TTTCCCGCAC TATGGTGACT TCGGGAACCA CCTTAATGAC GGTCGGAGCG
TTATGGATTA TGGGTGGTGG GCCGTTGGAA GGATTCTCGA TAGCCATGTT TATCGGCATC
TTGACTGGTA CTTTCTCATC GATATCGGTC GGGACTTCAT TGCCTGAATT TTTGGGATTA
ACGCCAGAGC ATTATAAAGT GCAAGTCATC ACCGACACGC CTTAA
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| Protein sequence | MKNINLTKWR YVSSAISIFL MLASLTIIGM KGFNWGLDFT GGVVTEVQLD RRITSSELQP
LLNAAYQQEV TVISASEPGR WVLRYADTAQ SNVDIAQTLA PLGEVQVLNT SIVGPQVGKE
LAEQGGLALL VAMLCILGYL SYRFEWRLAS GALFALVHDV IFVLAFFSLT QMEFNLTVLA
AVLAILGYSL NDSIIIADRI RELLIAKPKL AIQEINNQAI VATFSRTMVT SGTTLMTVGA
LWIMGGGPLE GFSIAMFIGI LTGTFSSISV GTSLPEFLGL TPEHYKVQVI TDTP
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