Gene Shewana3_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1014 
Symbol 
ID4479357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1186375 
End bp1186908 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content48% 
IMG OID639725555 
Producthypothetical protein 
Protein accessionYP_868655 
Protein GI117919463 
COG category[S] Function unknown 
COG ID[COG3295] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.235833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00784249 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCACTGC TGCTGTTAAT GCTGTTTTTT GCCGTAACCG GGATCACCTT AAACCATCCC 
AATTGGTTTT CTTCAGCGGA TCAAGAACCA CGACGTGAAC AGTTTGATAT TCCTAATTAT
TTAACACCTG CAGCGCCGCA GGAGCCTGAG TGGCGTTTAG CGGCGGGGCA TTGGTTAAAA
AGCCAGTGGG ATATGGATAT TGGCACTGCC GATATCGATG AGGATGAGAT AAGCCTAGTG
AATAAAGGCC CAGGCACCTA TCGCACCGTC ACCTTAGATC TGCTTGACGG CAAAGCCTAT
GTTGAGACTT TAGATTATGG CGTTATTGCG GTGCTGAACG ACCTGCACAA GGGGCGCAAT
ACCGGGATTG TCTGGGCTTG GGTGTTAGAT CTCTGCGCCT TGCTGATTAT TCTCTTTTCG
CTCACCGGCG CCTATTTGCT GCTGCCTCAA ACGAAACGAC TTAAAAAATC CTTGTTTTAT
ATGGTGCTCG TCAGTTCAGG CTGTGCACTT GTGTATGTCT ATTTTGTTCC ATAG
 
Protein sequence
MALLLLMLFF AVTGITLNHP NWFSSADQEP RREQFDIPNY LTPAAPQEPE WRLAAGHWLK 
SQWDMDIGTA DIDEDEISLV NKGPGTYRTV TLDLLDGKAY VETLDYGVIA VLNDLHKGRN
TGIVWAWVLD LCALLIILFS LTGAYLLLPQ TKRLKKSLFY MVLVSSGCAL VYVYFVP