Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_1014 |
Symbol | |
ID | 4479357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1186375 |
End bp | 1186908 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639725555 |
Product | hypothetical protein |
Protein accession | YP_868655 |
Protein GI | 117919463 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.235833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00784249 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACTGC TGCTGTTAAT GCTGTTTTTT GCCGTAACCG GGATCACCTT AAACCATCCC AATTGGTTTT CTTCAGCGGA TCAAGAACCA CGACGTGAAC AGTTTGATAT TCCTAATTAT TTAACACCTG CAGCGCCGCA GGAGCCTGAG TGGCGTTTAG CGGCGGGGCA TTGGTTAAAA AGCCAGTGGG ATATGGATAT TGGCACTGCC GATATCGATG AGGATGAGAT AAGCCTAGTG AATAAAGGCC CAGGCACCTA TCGCACCGTC ACCTTAGATC TGCTTGACGG CAAAGCCTAT GTTGAGACTT TAGATTATGG CGTTATTGCG GTGCTGAACG ACCTGCACAA GGGGCGCAAT ACCGGGATTG TCTGGGCTTG GGTGTTAGAT CTCTGCGCCT TGCTGATTAT TCTCTTTTCG CTCACCGGCG CCTATTTGCT GCTGCCTCAA ACGAAACGAC TTAAAAAATC CTTGTTTTAT ATGGTGCTCG TCAGTTCAGG CTGTGCACTT GTGTATGTCT ATTTTGTTCC ATAG
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Protein sequence | MALLLLMLFF AVTGITLNHP NWFSSADQEP RREQFDIPNY LTPAAPQEPE WRLAAGHWLK SQWDMDIGTA DIDEDEISLV NKGPGTYRTV TLDLLDGKAY VETLDYGVIA VLNDLHKGRN TGIVWAWVLD LCALLIILFS LTGAYLLLPQ TKRLKKSLFY MVLVSSGCAL VYVYFVP
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