Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0993 |
Symbol | |
ID | 4477521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1163145 |
End bp | 1164209 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725527 |
Product | lytic murein transglycosylase B |
Protein accession | YP_868634 |
Protein GI | 117919442 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000510709 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.159999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATTC TTCGAGCTTG TTTGGCTCCA CTGGCAGTAC TTTGCCTCAG TTCATATCTC CTTGGTTGCT CGACGGCAAA CGAGCCTGCG GCCCCCACAC CGCAGCCAAG TGCGGCGGTG ACCACACAGG CGCCAACGCC AGTATTACCC GAGGCCTTAA AGGCTGAGTT TATTAAAACC CAAATGGCAC AAGGCTTTAC CCAAGCCGAA GTTGAAAGTT TTTTAGCAAA GGCCAACTAC AACCAAGCCG TTATCGATGC TATTTCTCGC CCTTGGGAAG CCAAGCCTTG GCATCAGTAT TATCCGATTT TCCTCACCGA GAAACGCCTC AATGCAGGTC TAGCCTTCTG GAAAAAACAC GAGGCAACGA TTGCCAAGGC CGCGACAAAG TACCAAGTCG AGCCACAAAT TATTGTGGCC ATTATTGGTA TCGAAACCTT CTATGGTCAG TACACAGGTA ATTATCCGGT AATCGATGCG CTCTATACCT TAGGGTTTTA TTACGAGCCA AGAGCCACTT TCTTTCGCAA GGAATTTGGC GAGCTGATGA AGCTGGTAAA AGAAGAACAC TTAGATATCA ATAGCCTCAA GGGTTCCTAC GCCGGAGCCA TGGGCTTTGG TCAGTTTATT CCTTCAAGCT ACCGCCACTA TGCCGTGGAT TTTGATGGCA GCGGTAACCG TGATTTACTC CAGAGTCCAG AGGATGCCAT TGGCAGTGTT GCCAATTATT TCCATGAACA CGGCTGGCAG TTGCATGCAC CCGTTGCGCT CCCTTTAGTG AATAGCAGTG CCAATGCGCC TAAAGCCAAA GTGTGGGCTG GTGAGAAGTT GCAGTACAAG GTCTCTGATA TTCTCAGCCC AAGCTTATCG CTGGCCACCG CCCGCGATTT AGATGCCTCG CAAAAGGCCA TGCTCATCGA GCTCGAACAA GTGGGTAGCA AGGACTACTG GCTAGGACTC AATAACTTTT ATGTGATCAC CCGTTATAAC CGTAGCCCTT TGTATTCCAT GGCCGTTTAT CAATTTAGCC AACAACTGAA GCAACAACAT GACGCTAAAA AATAA
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Protein sequence | MPILRACLAP LAVLCLSSYL LGCSTANEPA APTPQPSAAV TTQAPTPVLP EALKAEFIKT QMAQGFTQAE VESFLAKANY NQAVIDAISR PWEAKPWHQY YPIFLTEKRL NAGLAFWKKH EATIAKAATK YQVEPQIIVA IIGIETFYGQ YTGNYPVIDA LYTLGFYYEP RATFFRKEFG ELMKLVKEEH LDINSLKGSY AGAMGFGQFI PSSYRHYAVD FDGSGNRDLL QSPEDAIGSV ANYFHEHGWQ LHAPVALPLV NSSANAPKAK VWAGEKLQYK VSDILSPSLS LATARDLDAS QKAMLIELEQ VGSKDYWLGL NNFYVITRYN RSPLYSMAVY QFSQQLKQQH DAKK
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