Gene Shewana3_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0984 
Symbol 
ID4477512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1155949 
End bp1157154 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID639725518 
Producthypothetical protein 
Protein accessionYP_868625 
Protein GI117919433 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTA ATACCACAGT GACACCCAAG GCTTTGCTGG TGGCGCCTAA GCTACAGGGG 
CGTCAGCGGA TCAATAGCAT CGACATGATG CGCGGCTTAG TGATGCTGAT TATGTTGCTC
GATCATGTGC GGGAGCGGTT TTTCCTGCAT ATGCAGGTGA GCGATCCTAT GGATTTAAGC
ACAACAAACT GGGCGCTGTT TGTCAGCCGT TTTGCGGCGC ACTTTTGTGC GCCGGTCTTC
GTCTTTTTAA CTGGGGTCTC GGCTTGGCTT TACGCTAATC GTGGCTATGG TGAACCGCGG
TCTGCGCGCG AGTTTTTAAT CAAGCGCGGA CTATTCTTAA TCGCACTCGA GGTGCTGGTG
ATTAATTTCT CATGGATGGG CAATTATCAC ACCCTGTGGT TGCAGGTGAT TTGGGTGATA
GGACTGAGCA TGTTGGCCCT TGCGGCACTT ATCAACCTCC CAAGGCTGTG GATGGCATTG
CTCGGGCTAT TGATTATCTT TGGCCATAAC CTATTGTCGC CTATTCATTT TACGCCAGAC
GAGTGGGGCT ATAGTCTGTG GACGATACTG CATGACCGAG GTTATTTGAT TGCCGAGGGC
GAGCTTAAGC TGAAGATAAG TTACCCAGCG CTACCTTGGA TTGGCGTGAT TTTATTGGGC
TATGTGACAG GCCCCGTCTT TGGCCGAGGG GGCGATGCGT GGCAGCGTCA GCAAAAATTG
ATATTGCTAG GGCTTGGCTG CGCTCTGCTG TTTGGCTTGC TGCGTGGATT CAATATCTAC
GGCGAGACGC TGCCTTGGCA GTTTGGCGAT ACCTTAGGCC AAACCTTAAT GTTGGTATTT
AACTTAACTA AGTATCCGCC ATCCCTCAGT TTTTTGTTGG TGACCTTGGG CGGAATGTTC
TATAGCTTAG TGCTGTTTGA GCGTTATTTT GCGACAGGCA GTGTATTAGG TTGGATGGGG
CAGAGGTTAG CAGTGTTTGG TTCAGTGCCT ATGTTCTTCT ATATCTTGCA CTTATATGTG
CTGCTGTTGC TGTATTCGCT GGCTAAATGG GTATTTGGCG CAAACCATGG TGAGCTGTTT
GGCGTAGCGC ATATGGGGTG GGTATGGCTG ATAAGCTTAG TCTTGATCCC CTTACTCTAT
TACCCCGTGC GTTGGTTTAG CCGTTACAAA GGACAGAGTC AGCAGGCTTG GCTTAAGTAT
CTCTAA
 
Protein sequence
MNSNTTVTPK ALLVAPKLQG RQRINSIDMM RGLVMLIMLL DHVRERFFLH MQVSDPMDLS 
TTNWALFVSR FAAHFCAPVF VFLTGVSAWL YANRGYGEPR SAREFLIKRG LFLIALEVLV
INFSWMGNYH TLWLQVIWVI GLSMLALAAL INLPRLWMAL LGLLIIFGHN LLSPIHFTPD
EWGYSLWTIL HDRGYLIAEG ELKLKISYPA LPWIGVILLG YVTGPVFGRG GDAWQRQQKL
ILLGLGCALL FGLLRGFNIY GETLPWQFGD TLGQTLMLVF NLTKYPPSLS FLLVTLGGMF
YSLVLFERYF ATGSVLGWMG QRLAVFGSVP MFFYILHLYV LLLLYSLAKW VFGANHGELF
GVAHMGWVWL ISLVLIPLLY YPVRWFSRYK GQSQQAWLKY L