Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0984 |
Symbol | |
ID | 4477512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1155949 |
End bp | 1157154 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639725518 |
Product | hypothetical protein |
Protein accession | YP_868625 |
Protein GI | 117919433 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTA ATACCACAGT GACACCCAAG GCTTTGCTGG TGGCGCCTAA GCTACAGGGG CGTCAGCGGA TCAATAGCAT CGACATGATG CGCGGCTTAG TGATGCTGAT TATGTTGCTC GATCATGTGC GGGAGCGGTT TTTCCTGCAT ATGCAGGTGA GCGATCCTAT GGATTTAAGC ACAACAAACT GGGCGCTGTT TGTCAGCCGT TTTGCGGCGC ACTTTTGTGC GCCGGTCTTC GTCTTTTTAA CTGGGGTCTC GGCTTGGCTT TACGCTAATC GTGGCTATGG TGAACCGCGG TCTGCGCGCG AGTTTTTAAT CAAGCGCGGA CTATTCTTAA TCGCACTCGA GGTGCTGGTG ATTAATTTCT CATGGATGGG CAATTATCAC ACCCTGTGGT TGCAGGTGAT TTGGGTGATA GGACTGAGCA TGTTGGCCCT TGCGGCACTT ATCAACCTCC CAAGGCTGTG GATGGCATTG CTCGGGCTAT TGATTATCTT TGGCCATAAC CTATTGTCGC CTATTCATTT TACGCCAGAC GAGTGGGGCT ATAGTCTGTG GACGATACTG CATGACCGAG GTTATTTGAT TGCCGAGGGC GAGCTTAAGC TGAAGATAAG TTACCCAGCG CTACCTTGGA TTGGCGTGAT TTTATTGGGC TATGTGACAG GCCCCGTCTT TGGCCGAGGG GGCGATGCGT GGCAGCGTCA GCAAAAATTG ATATTGCTAG GGCTTGGCTG CGCTCTGCTG TTTGGCTTGC TGCGTGGATT CAATATCTAC GGCGAGACGC TGCCTTGGCA GTTTGGCGAT ACCTTAGGCC AAACCTTAAT GTTGGTATTT AACTTAACTA AGTATCCGCC ATCCCTCAGT TTTTTGTTGG TGACCTTGGG CGGAATGTTC TATAGCTTAG TGCTGTTTGA GCGTTATTTT GCGACAGGCA GTGTATTAGG TTGGATGGGG CAGAGGTTAG CAGTGTTTGG TTCAGTGCCT ATGTTCTTCT ATATCTTGCA CTTATATGTG CTGCTGTTGC TGTATTCGCT GGCTAAATGG GTATTTGGCG CAAACCATGG TGAGCTGTTT GGCGTAGCGC ATATGGGGTG GGTATGGCTG ATAAGCTTAG TCTTGATCCC CTTACTCTAT TACCCCGTGC GTTGGTTTAG CCGTTACAAA GGACAGAGTC AGCAGGCTTG GCTTAAGTAT CTCTAA
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Protein sequence | MNSNTTVTPK ALLVAPKLQG RQRINSIDMM RGLVMLIMLL DHVRERFFLH MQVSDPMDLS TTNWALFVSR FAAHFCAPVF VFLTGVSAWL YANRGYGEPR SAREFLIKRG LFLIALEVLV INFSWMGNYH TLWLQVIWVI GLSMLALAAL INLPRLWMAL LGLLIIFGHN LLSPIHFTPD EWGYSLWTIL HDRGYLIAEG ELKLKISYPA LPWIGVILLG YVTGPVFGRG GDAWQRQQKL ILLGLGCALL FGLLRGFNIY GETLPWQFGD TLGQTLMLVF NLTKYPPSLS FLLVTLGGMF YSLVLFERYF ATGSVLGWMG QRLAVFGSVP MFFYILHLYV LLLLYSLAKW VFGANHGELF GVAHMGWVWL ISLVLIPLLY YPVRWFSRYK GQSQQAWLKY L
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