| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0979 |
|---|
| Symbol | |
|---|
| ID | 4478905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | + |
|---|
| Start bp | 1149941 |
|---|
| End bp | 1150867 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639725512 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868620 |
|---|
| Protein GI | 117919428 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2354] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGG CGAGTTTATT AACCTTACTC GACGATATTG CATCCATTTT GGATGACGTG
GCGGTGATGA GTAAGGTCGC GGCCAAGAAA ACCGCTGGGG TATTAGGGGA CGATTTGGCT
TTAAACGCCC AGCAAGTCAC AGGTGTGAGT GCTGACCGTG AATTACCCGT GGTTTGGGCG
GTCGCCTTAG GCTCGTTTCG CAATAAATTG ATTTTAGTGC CCGCAGCCAT GTTGATCAGC
GCCTTTATTC CTTGGGCTGT GACCCCCTTA TTGATGTTCG GCGGCTTGTT TTTATGTTTT
GAAGGCTTTG AGAAATTGCA CCACAGCTAT AGCCATCGAA AAGACAAACA TGCGGAGCAG
GGCGAATCTG ACTTACCGGA GATAAGCGAT CTCGCGGCCT ATGAGAAGGA AAAGGTGAAG
GGCGCGATCC GCACCGACTT TGTGCTGTCG GCAGAAATTA TCGCCATCAC CTTAGGCATA
GTCGCGGATA AGTCGCTGAC GACGCAATTT TTTACCCTCG CGATTATCGG TATTGTGATG
ACTATAGGTG TTTATGGTCT GGTGGCGGCG ATTGTCAAAA TGGACGATGC GGGTCTATAT
CTGAGCCAGT GTCAGGGCGA GTCGAGCTTC ACTCGCTTTA ATCGTAAGTT GGGTTTTGGC
TTGCTTAGCG CGGCTCCCGT GTTGATGAAG AGCTTAACCA TTATTGGTAC TGCCGCCATG
TTTATGGTGG GCGGCGGCAT TCTGACCCAT GGATTACATT GGGTCGGCGA GCAAATTCAC
CATGCCGAGC AATTTGTGGA AACCATTGCC GTCGTCGGCC CTGTACTTGG GTTACTGACG
CCGAGTGTGC TCAACGCGCT CTTTGGTATT GCAGCGGGCG CGGTGGCGGT GCTGCTGATG
ACGGGATTCC AAAAGCTGCG GAGCTGA
|
|---|
| Protein sequence | MAGASLLTLL DDIASILDDV AVMSKVAAKK TAGVLGDDLA LNAQQVTGVS ADRELPVVWA
VALGSFRNKL ILVPAAMLIS AFIPWAVTPL LMFGGLFLCF EGFEKLHHSY SHRKDKHAEQ
GESDLPEISD LAAYEKEKVK GAIRTDFVLS AEIIAITLGI VADKSLTTQF FTLAIIGIVM
TIGVYGLVAA IVKMDDAGLY LSQCQGESSF TRFNRKLGFG LLSAAPVLMK SLTIIGTAAM
FMVGGGILTH GLHWVGEQIH HAEQFVETIA VVGPVLGLLT PSVLNALFGI AAGAVAVLLM
TGFQKLRS
|
|---|
| |