Gene Shewana3_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0977 
Symbol 
ID4478903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1147689 
End bp1148879 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content51% 
IMG OID639725510 
ProductSAM-dependent methyltransferase 
Protein accessionYP_868618 
Protein GI117919426 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA GAATCAAACT TAAACCCGGT CGCGAAAAGT CCCTTGAGCG TCGTCATCCT 
TGGGTCTTTT CCAACGGGAT CCACAACGTT AAAGGTAAGC CCGAAGCGGG CGAGACCGTC
GATGTGGTTG CCCATGATGG TCATTGGTTG GGCCGTGGCG CCTGGTCTCC TGAGTCTCAA
ATCCAAGTGC GGATTTGGAC TTTTGATCGC GAAGAAGAAA TCGACCGTGA GTTTTTTAAG
CGCCGTATTC TGCGTGCCCA AGCGGGCCGC GACGATCTCA TTCGTGAGCA AGGCTTAACC
GGTTACCGCT TAATTGCCGC TGAGTCCGAT GGTTTGCCCG GTATTACTAT TGATAAATAC
GCCAATGTGT TGGTCTGCCA ATTGCTGAGC ATGGGCGCCG ATGTATGGCG TGACACTATT
GTTGATGTGC TCGCCGAGCT GTATCCCGAT TGCGCGATTT ACGAGCGCTC TGACGTCGAT
TCCCGTAAGA AAGAAGGCTT AGCCTCTACC ATGGGCTTAC TCCATGGCAC GTTGCCTGAG
ATGCCCGTCA TTATTGAAGA AAACGGTATT AAGATTGCCG TCGATGTGAC TAAGGGTCAT
AAGACTGGCT TCTACCTCGA CCAGCGCGAC AACCGTGCCA TGGCGGCGCG GTTTGTGAAG
GGCAAATCGG TTCTGAACTG TTTTTGCTAC ACGGGTACCT TTGGTCTGTA TGCCGCTAAT
GCCGGCGCTG CTAGCATTGA AAACGTCGAT GTATCGGCGC TTGCCCTCGA TACCGCGCGT
TTGAACATGC GAGTCAATGG CTTAAATGAT GACAATGTGC ATTACAACGA AGCCGATGTG
TTTAAGTTGC TACGCCAGTA CCGCGATGAG GGTAAAACCT TCGATGTGAT CGTACTCGAC
CCGCCAAAGT TTGCCGACAA TAAGTCGCAG CTCAATGGCG CCTGCCGCGG CTATAAAGAT
ATCAATATGA TTGCGCTGCA ATTATTAAAT CCGGGCGGGG TGCTGTTGAC CTTCTCTTGC
TCGGGATTAA TGCCTGCGGA TCTGTTCCAA AAAATCGTTG CCGATGCAGC ATTAGATGCC
AAACGTGAGA TCCAATTTAT TGAGCGTTTA AGCCAGGCGA GCGATCACCC GATTGGCAGC
GCCTTCCCAG AAGGTTTTTA CCTCAAGGGC TTAGTGGCTC GAGTGTGGTA A
 
Protein sequence
MAVRIKLKPG REKSLERRHP WVFSNGIHNV KGKPEAGETV DVVAHDGHWL GRGAWSPESQ 
IQVRIWTFDR EEEIDREFFK RRILRAQAGR DDLIREQGLT GYRLIAAESD GLPGITIDKY
ANVLVCQLLS MGADVWRDTI VDVLAELYPD CAIYERSDVD SRKKEGLAST MGLLHGTLPE
MPVIIEENGI KIAVDVTKGH KTGFYLDQRD NRAMAARFVK GKSVLNCFCY TGTFGLYAAN
AGAASIENVD VSALALDTAR LNMRVNGLND DNVHYNEADV FKLLRQYRDE GKTFDVIVLD
PPKFADNKSQ LNGACRGYKD INMIALQLLN PGGVLLTFSC SGLMPADLFQ KIVADAALDA
KREIQFIERL SQASDHPIGS AFPEGFYLKG LVARVW