Gene Shewana3_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0949 
Symbol 
ID4478875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1110035 
End bp1111114 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content51% 
IMG OID639725482 
ProductDNA polymerase IV 
Protein accessionYP_868590 
Protein GI117919398 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAAAA TCATTCATAT CGATATGGAT TGCTATTTTG CTGCGGTGGA AATGCGGGAT 
TTTCCCGAAT ACCGCGGTAA GCCTTTGGCC GTCGGCGGCA GTCGGGTGCA GCGTGGCGTC
ATCAGCACTT GTAATTATGA GGCGCGCAAA TTTGGTGTGC GTTCTGCCAT GGCGACGGGC
TACGCATTGA AATTGTGTCC CGATCTTATC CTCGTTCCCG GTCGTATGCA GGTTTACAAA
GAGGTCTCAC AGCAAATTCG CGCCATTTTC TGCCGCTACA CAGAGTTAAT CGAACCGCTT
TCCCTCGATG AAGCCTATTT AGATGTCAGC GATTGTAAGC TGTTTAAGGG CTCTGCCACT
TTAATCGCCG AGGCAATTCG CCGGGATATT TTGGCCGAAA CTGGGCTGAC GGCATCGGCT
GGCGTGGCGC CGATTAAATT TCTCGCTAAG GTCGCCTCTG ATTTAAATAA ACCCAACGGG
CAATGTGTTA TTCCACCCGA TGAGGTTGCC GAGTTCGTTA AAAGCTTATC CCTGCGGAAA
ATTCCCGGAG TAGGTAAGGT GACCGCTGAA AAACTGTCTT CACTAGGCTT AAATACCTGC
GCCGATGTGC AGGCTTATCC TAAGCAAGAG TTGATTGCTC GTTTTGGTAA GTTTGGCACA
GTGTTAGTCG AGCGGGCCCA TGGCATCGAT GAACGTGGAA TTTCGGTTAG CCGCGAGCGC
AAATCTGTGG GGGTTGAGAC CACACTCGCT CAGGATATTT ACACGCTTGA GCAGTGTCAG
CAGGTGATGC CGGGATTAAT TCAAGAGCTG TCCAGCCGTT TAGGGCGAAG CGCTAAGGGG
AGGCAAATCC ATAAGCAGGT GGTCAAACTT AAATTTAATG ATTTTAAACA GACCACCATC
GAGCATCGCA GTGACGAGGT CTCCGTGGTG ATGTTCTATG AGCTACTGAG CCAAGCAATG
GCTAGGCAAG AGGGCCGTGG AATTCGGTTA CTCGGGGTTT CTGTTGGACT CGCCGAGAGT
AAAGACACGC TTTCGCCGCT CATGGTACGC GAAACGAAGC AGTTGGATTT TGTGTTTTAG
 
Protein sequence
MRKIIHIDMD CYFAAVEMRD FPEYRGKPLA VGGSRVQRGV ISTCNYEARK FGVRSAMATG 
YALKLCPDLI LVPGRMQVYK EVSQQIRAIF CRYTELIEPL SLDEAYLDVS DCKLFKGSAT
LIAEAIRRDI LAETGLTASA GVAPIKFLAK VASDLNKPNG QCVIPPDEVA EFVKSLSLRK
IPGVGKVTAE KLSSLGLNTC ADVQAYPKQE LIARFGKFGT VLVERAHGID ERGISVSRER
KSVGVETTLA QDIYTLEQCQ QVMPGLIQEL SSRLGRSAKG RQIHKQVVKL KFNDFKQTTI
EHRSDEVSVV MFYELLSQAM ARQEGRGIRL LGVSVGLAES KDTLSPLMVR ETKQLDFVF