Gene Shewana3_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0942 
Symbol 
ID4478868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1103088 
End bp1103696 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content46% 
IMG OID639725475 
ProductNa(+)-translocating NADH-quinone reductase subunit E 
Protein accessionYP_868583 
Protein GI117919391 
COG category[C] Energy production and conversion 
COG ID[COG2209] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE 
TIGRFAM ID[TIGR01940] NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.451028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACATT ATATTAGCCT GTTAATTCGC TCTGTTTTCA TCGAAAACAT GGCACTGGCC 
TTCTTCTTAG GTATGTGTAC TTTCTTAGCG GTATCGAAGA AAGTGACTAC CGCGATGGGC
CTAGGGATTG CGGTAGTTGT AGTGTTAACT ATCTCTGTTC CTGCTAACCA AGTTATTTAC
CAAGGGCTGT TAGCACCTGG CGCACTGGCT TGGGCTGGTG CACCTGAAGC TGACCTAAGC
TTCTTGAAAT TCATTACCTT TATCGGTGTG ATTGCGGCTT TAGTTCAAAT TCTGGAAATG
GCACTGGATA AGTACTTTCC TCCTTTGTAC AACGCGTTAG GTATCTTCTT ACCTCTGATC
ACTGTGAACT GTGCGATTTT CGGTGCGGTA TCATTCATGG TTGAGCGTGA CTACAAGCTG
GGCGAAAGTG TGGTGTTTGG TTTCGGCTCT GGAGTAGGTT GGGCATTAGC TATCGTATTG
ATGGCCGGTA TCCGTGAGAA GCTGAAGTAT GCCGATGTGC CGAATGGCCT GCGTGGTTTA
GGTATTACCT TTATTACCGC TGGTTTAATG GCCTTAGGTT TCATGTCGTT TTCTGGTGTG
TCTCTGTAA
 
Protein sequence
MEHYISLLIR SVFIENMALA FFLGMCTFLA VSKKVTTAMG LGIAVVVVLT ISVPANQVIY 
QGLLAPGALA WAGAPEADLS FLKFITFIGV IAALVQILEM ALDKYFPPLY NALGIFLPLI
TVNCAIFGAV SFMVERDYKL GESVVFGFGS GVGWALAIVL MAGIREKLKY ADVPNGLRGL
GITFITAGLM ALGFMSFSGV SL