Gene Shewana3_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0938 
Symbol 
ID4478864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1099135 
End bp1100469 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content47% 
IMG OID639725471 
ProductNa(+)-translocating NADH-quinone reductase subunit A 
Protein accessionYP_868579 
Protein GI117919387 
COG category[C] Energy production and conversion 
COG ID[COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA 
TIGRFAM ID[TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000225132 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAGCAG GCGGACCAGA GCAAGTTATC 
CATAATGGCC CAGCCATTAA ACATGTAGCT ACTTTGGGTG AAGAGTATAT TGGCTTACGT
CCAACGATGA AGATCAAAGT GGGCGACAAA GTTCAAAAAG GTCAGGTGAT TTTCGAAGAT
AAGAAAAATC CTGGCGTAAA ATATACGGCT TTAGCCAGTG GTACTATATT AGACATTAAC
CGGGGCGCCC AGCGTGTGCT GCAGTCTGTT GTTATTCAAG TAGAAGGGAA CGAAAGCGTT
GCCTTTGCTA AGTATGACGC CACTGCTCTC GATACGCTAG ACTCGCAACT GGTCCGTGAC
AACCTGATCG AATCAGGCTT ATGGACTGCA TTGCGTACAC GTCCTTTCAG CAAAGTGCCT
GCCGTAGATT CTTCTGCCGC TGGTATTTTC GTCACCGCGA TTGATACGCA ACCCCATGCC
GCCGATCCTG TTGTAGTGAT CCGTGAGCAT AAAGAAGATT TTGCTAATGG TCTTAAGGTC
TTAGCAAGAC TTACCGAAGG TAAAGTTTAC CTTTGTAAAG CGCCTGGCGC CGATATTCCT
GCCGCTAATG CCCAAGTTGA AGAATTTGCC GGTGTTCACC CTGCGGGTCT TGTTGGTACT
CATATCCATT TCCTACTTCC TGCTTCTGCA AAACGTACTG TTTGGCATGT CGGTTACCAA
GATGTAATAG CCATTGGTCA GCTATTTACT ACCGGTCAAC TGAATACCGA ACGTGTGATC
GCAATTGCCG GTCCTAAAGC GGCTAAGCCA CGTCTGGTTC GCACTGTTTT AGGTGCAAGC
ATGACTGAAC TGACCGCGGG CGAAACCTTA GACGGTAACG TACGTGTTGT TTCAGGCTCT
GTGCTGAATG GCCGTACTGC TGTAGGTCCT CAAGGATATT TAGGTCGTTA CCACGCGCAG
GTGAGTCTGT TAGAAGAAGG CACTGAAAAA GAATTCTTTG GTTGGGTGTT ACCAGGCTCA
AACAAATACT CTATTACCCG TGCATTCCTT GGCCACTTAA GCGCTTCTCG TCTGTTCAAC
ATGACAACGA GCACAGGTGG TTCAGACCGC GCTATGGTGC CAATCGGCAA CTACGAGCGT
GTAATGCCAT TGGATATTCT TCCTACTATG TTGTTGCGTG ACCTGATCTC AGGTGACTTT
GACGGTGCTG CCACTTTAGG CGCGTTAGAG TTGGATGAAG AAGATCTCGC ACTGTGTACG
TTCGTATGTC CAGGCAAATA TGACTACGGT TCATATCTGC GTGACTGTTT AGATACGATC
GAGAGGGAAG GCTAA
 
Protein sequence
MITIKKGLEL PIAGGPEQVI HNGPAIKHVA TLGEEYIGLR PTMKIKVGDK VQKGQVIFED 
KKNPGVKYTA LASGTILDIN RGAQRVLQSV VIQVEGNESV AFAKYDATAL DTLDSQLVRD
NLIESGLWTA LRTRPFSKVP AVDSSAAGIF VTAIDTQPHA ADPVVVIREH KEDFANGLKV
LARLTEGKVY LCKAPGADIP AANAQVEEFA GVHPAGLVGT HIHFLLPASA KRTVWHVGYQ
DVIAIGQLFT TGQLNTERVI AIAGPKAAKP RLVRTVLGAS MTELTAGETL DGNVRVVSGS
VLNGRTAVGP QGYLGRYHAQ VSLLEEGTEK EFFGWVLPGS NKYSITRAFL GHLSASRLFN
MTTSTGGSDR AMVPIGNYER VMPLDILPTM LLRDLISGDF DGAATLGALE LDEEDLALCT
FVCPGKYDYG SYLRDCLDTI EREG