Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0938 |
Symbol | |
ID | 4478864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 1099135 |
End bp | 1100469 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639725471 |
Product | Na(+)-translocating NADH-quinone reductase subunit A |
Protein accession | YP_868579 |
Protein GI | 117919387 |
COG category | [C] Energy production and conversion |
COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000225132 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACAA TTAAGAAAGG ATTGGAACTG CCTATAGCAG GCGGACCAGA GCAAGTTATC CATAATGGCC CAGCCATTAA ACATGTAGCT ACTTTGGGTG AAGAGTATAT TGGCTTACGT CCAACGATGA AGATCAAAGT GGGCGACAAA GTTCAAAAAG GTCAGGTGAT TTTCGAAGAT AAGAAAAATC CTGGCGTAAA ATATACGGCT TTAGCCAGTG GTACTATATT AGACATTAAC CGGGGCGCCC AGCGTGTGCT GCAGTCTGTT GTTATTCAAG TAGAAGGGAA CGAAAGCGTT GCCTTTGCTA AGTATGACGC CACTGCTCTC GATACGCTAG ACTCGCAACT GGTCCGTGAC AACCTGATCG AATCAGGCTT ATGGACTGCA TTGCGTACAC GTCCTTTCAG CAAAGTGCCT GCCGTAGATT CTTCTGCCGC TGGTATTTTC GTCACCGCGA TTGATACGCA ACCCCATGCC GCCGATCCTG TTGTAGTGAT CCGTGAGCAT AAAGAAGATT TTGCTAATGG TCTTAAGGTC TTAGCAAGAC TTACCGAAGG TAAAGTTTAC CTTTGTAAAG CGCCTGGCGC CGATATTCCT GCCGCTAATG CCCAAGTTGA AGAATTTGCC GGTGTTCACC CTGCGGGTCT TGTTGGTACT CATATCCATT TCCTACTTCC TGCTTCTGCA AAACGTACTG TTTGGCATGT CGGTTACCAA GATGTAATAG CCATTGGTCA GCTATTTACT ACCGGTCAAC TGAATACCGA ACGTGTGATC GCAATTGCCG GTCCTAAAGC GGCTAAGCCA CGTCTGGTTC GCACTGTTTT AGGTGCAAGC ATGACTGAAC TGACCGCGGG CGAAACCTTA GACGGTAACG TACGTGTTGT TTCAGGCTCT GTGCTGAATG GCCGTACTGC TGTAGGTCCT CAAGGATATT TAGGTCGTTA CCACGCGCAG GTGAGTCTGT TAGAAGAAGG CACTGAAAAA GAATTCTTTG GTTGGGTGTT ACCAGGCTCA AACAAATACT CTATTACCCG TGCATTCCTT GGCCACTTAA GCGCTTCTCG TCTGTTCAAC ATGACAACGA GCACAGGTGG TTCAGACCGC GCTATGGTGC CAATCGGCAA CTACGAGCGT GTAATGCCAT TGGATATTCT TCCTACTATG TTGTTGCGTG ACCTGATCTC AGGTGACTTT GACGGTGCTG CCACTTTAGG CGCGTTAGAG TTGGATGAAG AAGATCTCGC ACTGTGTACG TTCGTATGTC CAGGCAAATA TGACTACGGT TCATATCTGC GTGACTGTTT AGATACGATC GAGAGGGAAG GCTAA
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Protein sequence | MITIKKGLEL PIAGGPEQVI HNGPAIKHVA TLGEEYIGLR PTMKIKVGDK VQKGQVIFED KKNPGVKYTA LASGTILDIN RGAQRVLQSV VIQVEGNESV AFAKYDATAL DTLDSQLVRD NLIESGLWTA LRTRPFSKVP AVDSSAAGIF VTAIDTQPHA ADPVVVIREH KEDFANGLKV LARLTEGKVY LCKAPGADIP AANAQVEEFA GVHPAGLVGT HIHFLLPASA KRTVWHVGYQ DVIAIGQLFT TGQLNTERVI AIAGPKAAKP RLVRTVLGAS MTELTAGETL DGNVRVVSGS VLNGRTAVGP QGYLGRYHAQ VSLLEEGTEK EFFGWVLPGS NKYSITRAFL GHLSASRLFN MTTSTGGSDR AMVPIGNYER VMPLDILPTM LLRDLISGDF DGAATLGALE LDEEDLALCT FVCPGKYDYG SYLRDCLDTI EREG
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