| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0937 |
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| Symbol | |
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| ID | 4478863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1096680 |
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| End bp | 1098731 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725470 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_868578 |
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| Protein GI | 117919386 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4772] Outer membrane receptor for Fe3+-dicitrate |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000203673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAGTC GCTACTTTGT CATGTCGCTG ACCGCGCTTG CGGTTTCCTG TGTCTACACT
CATCCCCTCA AAGCAAACCC ACTCTATTCT CAAACACTCG ATCTGATTGA GCTCAATGAC
CAATATCACT CCAGTGATGA TGGGATGCAG CTGAGTTACT TAAATAGCTT AACCTTATTG
CGGGCCGACC ACAGTGGAAA TACCGCGAAT ATCAGTATGC GCTCCGCTAG CCAAGGTGTG
GCCGTGATGC AAGATAGGGT GTATTTTTCA CCCGCGCCTT ATTCGGCGCC GCAGTTGCAG
TTATTGCCTA ACCTTTTACT ACAGCAAAAT GTTACTAGCA TACCACTGGC GGATATGACG
GTAGGCGGGC AGGGCGCTTT CGGTGTGGTG AATTATCAGA GCCTTGAAAT AGCTAACCGA
CCTCAGTCGG GCAGCTTTCT CGTTGAAGGT TCGACAGAGT CGGATTTGAA TGCCGGCATG
AGTTGGGGCG TTAAGCAAAA AGAATATGGC GCATTATTCG CAGCGAATTA CCAGAAAGAA
CAAGGTGATG CGAATTTTTT CAATGGCAGC GATGCCGATA GAACCAAAAC GGATATGTTG
TTCAAGGTGA ATGCGGCAAG TTTGCTTGGC GCACGCAGTC CGCAGCAGAC GGAATTTACC
TACCAATTTA TCGATGATAA CAGTTATCGC TCGCAGCTTG GTGTCACCAC GGCGGACTGG
CAGCAGGATC CCTTACTCTT GTACTCGGCA ACGGCGCAGG ATAAGCATAA AGGGCGGCAG
CACAAGTATC AGCTTTCACA CCAAGTGGAT TTAGGCGGCA GTAAAGTGAT CAGTGACTTT
TACTATCAGT CCTATTCACA ACAGCTGGCA CAACTTGGGT TGTTTAATGG GCAAGAGATT
GACACAGCAA CGCTTGCCGA TATCGCCGCC TTTGATCGAG CTCCAAGTGC AAATGGCGCC
GATTTAAATC TGCTCGTCCA AGATAACGAT TACAGTGCCT TTGGCGCCCA GACCCAAGCC
ATAAACCAGT ACGGCGAACA TCAGATCATT TACAGCGCTC GTTATCATAC GGATAAGGCG
GAAATGCGCT TTGGCGAGCA AACGGCGTTA TGGCAAGCGG ATAGAAGCCT TGCGGTTGAT
GAGTCAAACG CGTTGTTCGC TTATACCGAT GATGCCACTG CGCTAACGTC GGCCATTGAT
TCGCTATTTC GCTGGCAAGG CATGCAAATC AAGTTAGGCC TGACTTACGA GCATGTGAGT
GTTAATCGTG AAGTGAATCA GCCTGTTGCG AGACTCGATG AAGCGGATTT CTCCGACAGT
GATTGGATGC CGCAATTAGG TGTGCTTTAT GATGCGGGCG ATTGGCGTTT TAGTACCGAT
ATCCGTAGGG CATGGACTGC GGCGAGTGCG GGAAATACTA CACAAGAGGC TCAGGTGTCG
CTGCACTATC AAGTGAGCGC CCAATATGCG CGTGAAGGGA TAAAAGCCGA TTTACGGGCC
TATGTGCAAG AGTTCGACAA TTTGCATGTG GACTGCGATA GCTATTCGAT GTGCGCCGAT
GCACGCTTGT TAACCCAAGA GAATATTCCC GATGTACTCA CCTATGGTGT AGAACTTGGC
CTTGGCTATC GCTGGGACTT GGGTGGGGTA GAGCTACCCT TAGGGCTAAA TTATCAATAT
CTTAGCGCTG AGTATCAAAC CAGTACTTGT ACCGATGTTC AAGGCTGTGT TCTAGAGGGC
GATAGATTAG CTTGGTTACC CGAACATCAA TTGCAGTTGA GTGCAGGGGT TAACTATGGC
GAATATCAAT TAAATCTTGA GGCGGCCTAT CAATCTGAGC GCGATTTCAG CCAATTTGGC
AGTGAGTTGC AACGGGTATC AGGCCAATGG CGGGTCGATT TAGCGGCAAA CTATGATTTT
GATAAACACC ATAGGTTGTA TTTTAGGGTA GAAAACCTCC TCGATGAGTC CTTAGTGACC
GCAGCATCAA ATAGCGGAAT TCGGACTGAA AATGGACGGA TCAGCTATTT GGGTTATCAG
TGGCGTTTCT AA
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| Protein sequence | MSSRYFVMSL TALAVSCVYT HPLKANPLYS QTLDLIELND QYHSSDDGMQ LSYLNSLTLL
RADHSGNTAN ISMRSASQGV AVMQDRVYFS PAPYSAPQLQ LLPNLLLQQN VTSIPLADMT
VGGQGAFGVV NYQSLEIANR PQSGSFLVEG STESDLNAGM SWGVKQKEYG ALFAANYQKE
QGDANFFNGS DADRTKTDML FKVNAASLLG ARSPQQTEFT YQFIDDNSYR SQLGVTTADW
QQDPLLLYSA TAQDKHKGRQ HKYQLSHQVD LGGSKVISDF YYQSYSQQLA QLGLFNGQEI
DTATLADIAA FDRAPSANGA DLNLLVQDND YSAFGAQTQA INQYGEHQII YSARYHTDKA
EMRFGEQTAL WQADRSLAVD ESNALFAYTD DATALTSAID SLFRWQGMQI KLGLTYEHVS
VNREVNQPVA RLDEADFSDS DWMPQLGVLY DAGDWRFSTD IRRAWTAASA GNTTQEAQVS
LHYQVSAQYA REGIKADLRA YVQEFDNLHV DCDSYSMCAD ARLLTQENIP DVLTYGVELG
LGYRWDLGGV ELPLGLNYQY LSAEYQTSTC TDVQGCVLEG DRLAWLPEHQ LQLSAGVNYG
EYQLNLEAAY QSERDFSQFG SELQRVSGQW RVDLAANYDF DKHHRLYFRV ENLLDESLVT
AASNSGIRTE NGRISYLGYQ WRF
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