| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0935 |
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| Symbol | |
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| ID | 4478861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1094748 |
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| End bp | 1095860 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639725468 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_868576 |
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| Protein GI | 117919384 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.113128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCATT TGGGGTGCCT AATCTTTGCG GTATTGCTTA TTGGTCTCGG AGGGTGTAAT
CCCGCGCCCC AGCATATCGA GCAGACTGCA GCACCTCATC CCGATGCGAC TCCCGTTAAA
GATGTTATCG AGTGGCGTTT AGCCACGTCT TGGCCGAAAA ACTTTGCTGG TTTAGGTATG
GCACCTGAGC GTTTTGCCAA GCTGGTGAAC GAGATGTCCC ATGGCCGCTT GCAAATTCAT
GTGTATGGCG CGGGAGAATT AATGCCCGCC TTTGCGGTGT TCGACGGGGT AAGCCAAGGT
AAAATCCAAA TGGCCCACGC CGCCTCCTAT TATTGGAAGG GGAAAGCGCC CGCCTCACAG
TTTTTTTCTT CTATCCCCTT TGGTATGACG GCCCAAGAGA TGAACGGCTG GCTGCATTAT
GGTGGCGGCA TGGCATTGTG GGAGGAGGTC TATCGCCCCT TTGGCATCAT TCCATTAGCG
GGTGGCAATA CGGGGATGCA GATGGGCGGC TGGTTTAATA AACCTATTAA TAGCATTGCC
GATTTTAAAG GCTTGAAGAT CCGTATGCCG GGCTTGGGGG GCGAAGTGCT AAAACGCGTT
GGTGCCGTAC CCGTCAATAT GGCGGGCAGG GAGCTTTATG GCGCTTTGCA AACGGGGTCT
ATCGATGCGG CTGAGTGGGT TGGGCCTGTC AATGACCTCG CTTTTGGTTT ACATAAAGTC
GCCAAATATT ACTATTACCC CGGTTGGCAC GAGCCTGGCT CCAATATGGA GTTTTTGATT
AATAAGGGTG CGTTCGAGAG TCTTCCCCAA GATTTACAAG CCATAGTCAA AACGGCTGCA
CGCGCCATCA ATCAAGATAT GTTGGACGAA TACACCACGC GTAACGTGAC TGCGCTTGAC
ACCTTAGTCA AAGATGAAGG TGTGGTGCTT AAGGCTTTTC CGCCCCAGGT GCTCACCGAG
CTTGAACGTA TTTCACAGCA GGTCATTGAA GAGCAGGCCG AGCAGGATCC TATGATGCGC
AAAGTGTATC GCGCTTACCA TGCCTATGAG CAGGGGGGGC GTGAGTATCA TAAGATTTCA
GAGGATGCTT ACAGCCAGCA GCGCCAGCAC TAA
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| Protein sequence | MRHLGCLIFA VLLIGLGGCN PAPQHIEQTA APHPDATPVK DVIEWRLATS WPKNFAGLGM
APERFAKLVN EMSHGRLQIH VYGAGELMPA FAVFDGVSQG KIQMAHAASY YWKGKAPASQ
FFSSIPFGMT AQEMNGWLHY GGGMALWEEV YRPFGIIPLA GGNTGMQMGG WFNKPINSIA
DFKGLKIRMP GLGGEVLKRV GAVPVNMAGR ELYGALQTGS IDAAEWVGPV NDLAFGLHKV
AKYYYYPGWH EPGSNMEFLI NKGAFESLPQ DLQAIVKTAA RAINQDMLDE YTTRNVTALD
TLVKDEGVVL KAFPPQVLTE LERISQQVIE EQAEQDPMMR KVYRAYHAYE QGGREYHKIS
EDAYSQQRQH
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