Gene Shewana3_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0930 
Symbol 
ID4478856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1087331 
End bp1088623 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content51% 
IMG OID639725463 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_868571 
Protein GI117919379 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG AATCACTGGC ATTACACCAC GGATATGAAT CAGAGGCGAC CACGAAAGCC 
GCTGCGGTAC CTATCTATCA GACCACTTCC TACACCTTCG ATGATACCCA ACATGGTGCT
GATTTATTTG ACTTAAAAGT CGCAGGTAAT ATCTATACGC GGATTATGAA CCCGACGAGC
AGCGTGCTCG AACAGCGACT TGCGGCCATT GAAGGCGGCA TAGGCGCGCT GGCGCTTGCC
TCGGGAATGG CGGCCATTAC CTATGCGATT CAAGCGCTTA CTCAGGTGGG GGACAATATT
GTCAGTACCA GTCAGCTCTA CGGCGGCACT TATAATCTGT TTGCCCATAC ATTGCCGCGC
CAAGGAGTCG AAGTGCGGAT GGCAGCCTTC GATGATTTTG AAGAGCTCGA TGCTTTAATT
GATGCTAAGA CCAAGGCGCT ATTCTGTGAG TCCATAGGTA ACCCTGCTGG CAATATTGTT
GATCTTAAAC GTTTAGCCGA GATAGCCCAT AAACACGGCG TGCCTTTAAT TGTCGATAAC
ACTGTTGCCA CCCCTGTTTT ATGTCGCCCG TTTGAACATG GCGCCGATAT CGTTATCCAT
TCGTTGACCA AATACATTGG CGGCCATGGA ACGACAATTG GCGGCGTGAT TATTGACTCG
GGCAAGTTCG ATTGGGTGGC GAACAAAGAA CGCTTTGCCC TGCTCAATCA AGCCGATCCT
TCCTACCATG GTGTGGTGTA TACCGAGGCC TTTGGTGCCG CAGCCTTTAT TGGACGCTGC
CGCGTGGTGC CGCTGCGTAA TACTGGGGCG GCGCTCTCAC CTCACAGTGC ATTTTTGCTG
CTACAAGGGC TGGAAACCTT GAGTCTGCGT ATGGAACGCC ACTGCTCGAA TGCCTTGGCA
TTGGCCGAAT ACTTGATACT GCATCCTTCA GTCAGCTGGG TGAATTACGG TGCTTTGCCG
AGTAGCCCTT ACCGTGAAAA TTGCCAAAAG ATCACCGGTG GTAAAGCCTC TGGGATTATC
AGCTTTGGTA TTAAAGCGGC CACTCCCGAG GAGGGTAAAA TCGCTGGTGG CAAGTTTATC
GACGCGCTGC AGATGATTTT GCGCTTAGTG AATATAGGTG ATGCCAAATC GCTTGCCTGC
CATCCCGCCA GCACCACTCA CAGACAGTTG GACGCGAACG AGCTTGCTAG AGCCGGGGTG
TCTGAGGACT TAATTCGAAT CTCCGTCGGC ATTGAACATA TCGACGATAT TATTGCCGAT
GTGGCGCAGG CGCTGGAAAA AGCCTTGGCT TAA
 
Protein sequence
MKLESLALHH GYESEATTKA AAVPIYQTTS YTFDDTQHGA DLFDLKVAGN IYTRIMNPTS 
SVLEQRLAAI EGGIGALALA SGMAAITYAI QALTQVGDNI VSTSQLYGGT YNLFAHTLPR
QGVEVRMAAF DDFEELDALI DAKTKALFCE SIGNPAGNIV DLKRLAEIAH KHGVPLIVDN
TVATPVLCRP FEHGADIVIH SLTKYIGGHG TTIGGVIIDS GKFDWVANKE RFALLNQADP
SYHGVVYTEA FGAAAFIGRC RVVPLRNTGA ALSPHSAFLL LQGLETLSLR MERHCSNALA
LAEYLILHPS VSWVNYGALP SSPYRENCQK ITGGKASGII SFGIKAATPE EGKIAGGKFI
DALQMILRLV NIGDAKSLAC HPASTTHRQL DANELARAGV SEDLIRISVG IEHIDDIIAD
VAQALEKALA