| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0929 |
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| Symbol | |
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| ID | 4478855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1085688 |
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| End bp | 1087100 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725462 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_868570 |
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| Protein GI | 117919378 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.892808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAAT ACCAACAGTT AGCGCAGGAT CTCAAAAACC GAATTTCTCA AGGTGTCTGG
CAGGCGGGGG ATAAACTGCC CTCATTGCGG CAAACCGTGA CGGATTCGGG GCTGAGTTTA
ATGACGGTGC TTAACGCCTA TCAGTTGCTC GAAAGCCAAG GCGTGATATT GGCGCAGGCA
AAATCCGGTT ACATAGTGGC GCCTCAGCCC GAAGCCTTTC GTTATCCAGA GACTCAACGA
CAAATCTATT TCTCCGATAG GCTCGATATT AACGAGTTTG TGTTTAACGT ATTACAGGCA
TCGAAACAGG CGGGGATTGT GCCCTTTGGC TCAGCATTCC CCGATCCCAG TTTATTTCCA
CAGCAAGCCT TGGCGCGCTC GTTGGTCAAG GTCACTCGGC AGATGTCGCC GTCGTTTGCG
GCCGATAATC TTCCCCCCGG TAATGCTGGG TTACGCAAGG CGATTTCCCA ACGTTATGCC
AAGTTAGGCA TGAGCGTGGC GCCCGATGAA ATTTTAATTA CCTCGGGGGC GATGGAGGCG
CTGAACTTGA GCTTAGCGGC CTTGGCTCAG GCGGGGGATT GGGTCGTGAT TGAATCGCCT
ACCTTTTATG GTGCGATGCA AGCCATTGAA CGCCTCAAGC TGAGGGCGAT TGCGGTCGCG
ACGGATCCCC GCGAAGGGAT TGATCTTAAC GCTTTGGCTG AAGTACTTAA GACCTATCCC
GTCAAAGCCT GTTGGTTGAT GAGTCTGCAT CAAAACCCCT TAGGTTGTAG TTTGTCTGAC
CAGAAAAAAC AGGCTGTTTA TCAACTGCTT TGTGAACATA ATGTCAGTCT GATTGAAGAT
GATGTATATC AAGAGCTTTA TGTCGGTTCG AGTGCGCCTA GGCCGATTAA AGCCTTAGAC
ACTCAAGGCT GCGTACTGCA TTGTGGTTCC TTTTCTAAAT CCTTGATTGC GGGATATCGA
GTCGGTTGGG TTGCCGCGGG GCGCCATGCC CCGCAATTGC AACGCTTGCA ATTAATGTCG
ACCCTCTCAA CCAGTGCGCC TATGCAACTG GCCATCGCCG ATTTTATTCA GTCACCCCAA
TATGAGCGTC ATTTAAAGCG CTTACGCCAC ACCTTAGCGG ATCGCAAATT TGCCATGTAT
CAGTTGCTGC GGGCTCACTT GCCGGAGTCT GTAAGTGTGA ACTTTGAGCC GGGCGGTTAT
TTCCTCTGGC TGGCGTTGCC TAGTCATATG GATGCGACGC AGATATACCA TAGTGCACTT
GAGCGAGGGA TCAGTATCGC GCCGGGGAAT CTCTTTAGTA ATCAAGCAGA GTTTCGCCAT
TTTATGCGCA TTAATGCCTC CTACGATTGC TCACCCGAGT TAGTGCGTGC GGTAAAAGCG
CTCGCGCAGA TCCTAGAGCA CTCCCCGAAT TAA
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| Protein sequence | MSKYQQLAQD LKNRISQGVW QAGDKLPSLR QTVTDSGLSL MTVLNAYQLL ESQGVILAQA
KSGYIVAPQP EAFRYPETQR QIYFSDRLDI NEFVFNVLQA SKQAGIVPFG SAFPDPSLFP
QQALARSLVK VTRQMSPSFA ADNLPPGNAG LRKAISQRYA KLGMSVAPDE ILITSGAMEA
LNLSLAALAQ AGDWVVIESP TFYGAMQAIE RLKLRAIAVA TDPREGIDLN ALAEVLKTYP
VKACWLMSLH QNPLGCSLSD QKKQAVYQLL CEHNVSLIED DVYQELYVGS SAPRPIKALD
TQGCVLHCGS FSKSLIAGYR VGWVAAGRHA PQLQRLQLMS TLSTSAPMQL AIADFIQSPQ
YERHLKRLRH TLADRKFAMY QLLRAHLPES VSVNFEPGGY FLWLALPSHM DATQIYHSAL
ERGISIAPGN LFSNQAEFRH FMRINASYDC SPELVRAVKA LAQILEHSPN
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