| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0916 |
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| Symbol | |
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| ID | 4477461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1071423 |
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| End bp | 1072133 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725449 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_868557 |
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| Protein GI | 117919365 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.659376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCG CCAAATACCT TGCCCAATGC GGCATTAGTT CACGCCGTGA AGCCTGCCGC
TTGATTGAGG CCGGACGCAT CAGCCTCAAT GGCAAGATAG CCAAGCATAC CGATGCCGTG
CATTTCGATG CTGACGGCCA ATGTCTCGAT AGCCTCTGCT TAGATGAAAA GCCCATTTCG
GGCGCCGAAG CACTCAGCTA TTGGATCTTC AATAAAGCCG TGGGCACAGA TTGCCGTTTG
TTAGACGCCG ATAAATCCAG TTTGCTGCAT TTACTGCCAA CTACGCCAAG ACTCTACCCT
GTTGGCAGAT TAGACAAGGA TTCCCGCGGT TTATTATTGC TGACTAACGA TGGCGAACTC
ACCCATAAAC TGATGCACCC TAGTTTTGCC CACAGTAAAA CCTACCATGT GCAGCTCGAT
AGACCCTTCA ACGATGCCTT TATCGCGCAA ATGGCCAGCG GCGTGCAATA CAAAGAAGTA
CGCACACTCC CCTGCCAAGT CACACGGTTA AGCGCAGACC GTTTTGAAAT TGTGCTCACC
CAAGGGTTAA ATCGCCAAAT TCGGCGCATG TCCAACGCCT TGGGTTATAA GGTGATTGAC
TTACAACGCG TCGCGTTAAT GACATTAACC CTAGCATCCT TAGCCGAAGG CGAAATGCGC
CCACTCAGCC CAGAGGAAAT TACAACACTT AAAGCCGCAG TGATGATTTA G
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| Protein sequence | MRLAKYLAQC GISSRREACR LIEAGRISLN GKIAKHTDAV HFDADGQCLD SLCLDEKPIS
GAEALSYWIF NKAVGTDCRL LDADKSSLLH LLPTTPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPSFA HSKTYHVQLD RPFNDAFIAQ MASGVQYKEV RTLPCQVTRL SADRFEIVLT
QGLNRQIRRM SNALGYKVID LQRVALMTLT LASLAEGEMR PLSPEEITTL KAAVMI
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