Gene Shewana3_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0890 
Symbol 
ID4477101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1036665 
End bp1037381 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID639725426 
Productglutamine amidotransferase 
Protein accessionYP_868534 
Protein GI117919342 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00279446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.555158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTC ATTGCATTAT TCATGAAAGC TATGAAGGTC CAGGATATTT TAATGATTGG 
GCCGCCAGCA AAAACTACAA AATGAGCTTT AGCAGAGTCT ATCTAGGTGA AGCCCTCCCC
GAAGATACTG ATGGTTTTGA TCTGTTAATT ATCCTCGGAG GCCCTCAGTC TCCCGCCACA
TGCCAAAGCG ATTGTCCATA TTTTGATAGT CAAGCAGAAC AAAGACTTAT CAGGCAAGCT
ATTCAAACAA ATAAAGCCGT TGTGGGGGTT TGCCTTGGCG CACAATTAAT TGGCGAAGCA
TTAGGCGCCC GTTATCAAAA GAGCCCACAT GCCGAGATTG GTTATTTCCC CATAGAGCTA
ACAGCAGCAG GTAAAAATGA TATTAACCTT AAGACATTTT CGACAACCGA AATAGTCGGC
CACTGGCATA ACGACATGCC AGGCCTCACT CCCAATAGCG AAGTACTCGC CACCAGTGAA
GCTTGCCCAC GACAAATTGT GCGTTACACA AATTTAGTTT ATGGATTCCA ATGCCATCTT
GAATTTATCA GTAGTCAATT AACGCCACTC ATTGCCCAAG AACAGGCTTT TTCCAGTACG
CATACCATGC CATACATTCA AAGCCCTGAG TTCATCCTGG AGCAATCAAC GACTCAGATG
AATCAGTTGC TAGGGCATTT TTTAGATAAT CTAGTCTTAG CCTATCAAGC GGTATAA
 
Protein sequence
MQIHCIIHES YEGPGYFNDW AASKNYKMSF SRVYLGEALP EDTDGFDLLI ILGGPQSPAT 
CQSDCPYFDS QAEQRLIRQA IQTNKAVVGV CLGAQLIGEA LGARYQKSPH AEIGYFPIEL
TAAGKNDINL KTFSTTEIVG HWHNDMPGLT PNSEVLATSE ACPRQIVRYT NLVYGFQCHL
EFISSQLTPL IAQEQAFSST HTMPYIQSPE FILEQSTTQM NQLLGHFLDN LVLAYQAV