| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0889 |
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| Symbol | mdoD |
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| ID | 4477100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1034901 |
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| End bp | 1036577 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725425 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_868533 |
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| Protein GI | 117919341 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000629377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.387819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA ATTTATTTCC CGAACAAAGA CATTTAAATC GTGAGCCGAT GGTGATGCCG
TCGGTGGAAG CTCAGTCTAC CCGTAGCCGT TTACAACGCA TGGTGGGCAG TGTGCTACTC
ACTTGCAGCG TGTTGTTAAG CTTATCTGCT TGTGCAGCGG GTAAGGCGAG TGCGCCGCAG
GAAGAAGAGT TTAGCTACGC CTGGTTGAAA GGCTATGCCC ATACGTTGGC GGCTGAGTCC
TATGTGAGCC ATAAGGGCGA GTTGCCAAAA AGCTTACAGG GCATGAGCTG GGATGATTAC
CAGCAGTTTC ATTTCAAGAA AAAAGCCGCC CTGTGGCGTG AGGATGATTC GGAGTTTCGC
GCCGAGTTAT TCCACTTAGG TCTGTACTTC GATACGCCTG TGCATATTTA CCAATTGGAA
AATGGCAAGG CAAAGCTGAT CGAATATTCG TCTTCCATGT TCGATTACGG TAAATCCAAG
GTAAAGGGTA GCCAATTACC GAAAGACCTA GGCTTTGCTG GGTTTAGAAT GCAGTTTAAT
ACCGACTGGC AGCGTGACGT GGTCGCCTTC TTAGGGGCCA GCTATTTCCG CGCCGTAGGT
CAAGAAATGC AATATGGTCT ATCTGCCCGT GGTTTAGCGG TCGACACTGC GCTGCCTAAG
CCTGAAGAAT TCCCTATGTT TACCCGTTTC TGGTTAGAGA AACCACAACC GGGTTCTAAT
ATTGCGACTG TGTACGCTCT GTTAGATTCA CCAAGTGTAA CAGGGGCTTA CCGTTTTGAT
ATCGAACCGG GTGAGCGTTT AAAAATGAAG GTCGATGCGG CGATTTACCC GCGTAAGGCC
ATCGAACGTT TAGGCGTTGC ACCACTGACC AGTATGTACA TGGTGGGTGA AAACGATCGC
CGCACCGGTT ACGACTGGCG CCAAGAGATC CACGATTCAG ACGGTCTTGC CATGCACACG
GGTAACGGTG AATGGATTTG GCGTCCGCTG GGCAACCCAA GCAACCTGCG TTTCAATGCC
TACAGCGATG AGAATCCAAA GGGCTTTGGT TTAATGCAGC GTGACCGTAA CTTCGACCAT
TATCAAGATG ATGGTGTGTT CTACGAGAAG CGTCCAAGCC TGTGGATTGA GCCAACTGGT
AACTGGGGTA AAGGTTCGGT GCAGTTAGTG GAAATTCCAA CACTGGATGA AACCTTCGAC
AATATCGTGG CGTTTTGGAA CCCTGCTGAG CCCATTCAAC CGGGTCAAGA GTTACTCTAC
AGCTACAACA TGTACTGGGG CGGTATTCCA CCCGTGCAGT CACCCCGTGC CCGCGTAGTC
GATACCTTTA CCGGTATTGG TGGTGTGGTT GGTCAAAAGC GTAAGTACTA TAGCAAGCGC
TTTGTGATTG ATTTTGCTGG TGGTTCCTTA CCTATGCTGG GTAAAGATAC CCAAGTGAAA
GCGGTGATTT CGACCTCTCA GGGTCGTGTA GAAATCGAAT CTGCTCGCCC ACAACATGCG
ATTAACGGTT ACCGCGCTAT GTTTGACCTA GTGCCGCCAG AAGACAGCGT TGAGCCAATT
AACCTCAGAG TTTACTTAGA GGTAGATGGT CAGCCGTTAA CTGAGACTTG GATGTACCAG
TGGACACCAC CACCAGTGAA CGAGCGTGAG CTGCATAACG CCGGTCATCT GCAGTAA
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| Protein sequence | MQPNLFPEQR HLNREPMVMP SVEAQSTRSR LQRMVGSVLL TCSVLLSLSA CAAGKASAPQ
EEEFSYAWLK GYAHTLAAES YVSHKGELPK SLQGMSWDDY QQFHFKKKAA LWREDDSEFR
AELFHLGLYF DTPVHIYQLE NGKAKLIEYS SSMFDYGKSK VKGSQLPKDL GFAGFRMQFN
TDWQRDVVAF LGASYFRAVG QEMQYGLSAR GLAVDTALPK PEEFPMFTRF WLEKPQPGSN
IATVYALLDS PSVTGAYRFD IEPGERLKMK VDAAIYPRKA IERLGVAPLT SMYMVGENDR
RTGYDWRQEI HDSDGLAMHT GNGEWIWRPL GNPSNLRFNA YSDENPKGFG LMQRDRNFDH
YQDDGVFYEK RPSLWIEPTG NWGKGSVQLV EIPTLDETFD NIVAFWNPAE PIQPGQELLY
SYNMYWGGIP PVQSPRARVV DTFTGIGGVV GQKRKYYSKR FVIDFAGGSL PMLGKDTQVK
AVISTSQGRV EIESARPQHA INGYRAMFDL VPPEDSVEPI NLRVYLEVDG QPLTETWMYQ
WTPPPVNERE LHNAGHLQ
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