| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0888 |
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| Symbol | |
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| ID | 4477099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1033169 |
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| End bp | 1034644 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725424 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_868532 |
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| Protein GI | 117919340 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000228832 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.272877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATTT TCTTCTTATG CCTTGCGCTC TTAGTGCTGG CATACAAGTT TTATAGCCCA
TTTGTTGAGC GCCAAGCAGG GATTGATCCT AAAGCGCAAA CACCCCAAGC AAGATTCGAA
GACGGTGTGG ACTATGTGCC CGTTCACCCC GCCAAAGCGT TTTTGATCCA ATTCTTAAAC
GTTGCCGGTG TAGGCCCGAT TTTTGGTCCG ATCCTAGGTG CTTTATATGG TCCAGTGGCG
TTACTCTGGA TTGTGTTAGG TAACATTATT GGCGGCGCGG TACACGACTA TTTCTCGGGT
GTGTTAAGCA TTAAAGAAGA CGGTAAGAGC CTGCCAGAAA TCGCTGGTCA CTACTTTAAT
GTCTACTTTA AAGGCGTGAT GCTGCTGTTT ACTGCGATGT TACTGTTCTT CGTGGGCGTG
GTGTTCATCA TGAGCCCTGC GGGCCTGTTA AGTAACCTAG ACTATTTTAA AGACACCATT
TTTGGCAATA ACACCTTCTG GGTGTTAGTG ATTTTGGCTT ATTACTTCTT AGCCACTATG
CTGCCAATCG ATAAGATCAT CACTAAGCTT TACCCTGCTT TTGGTCTGTT GATGATCGTT
ATGACCACTT CGATTGCGGT TGCTCTGCTG ATCAGCGCGC CACAGTTACC CGAAATGGGC
GATGTGTTTG CTTACTTCAA TCACAGCCAT TACAACAATG AGTTACTCGA GCCAAACCCT
GACGGTTTGC CGATTTGGCC ATTGCTGTTT GTGACTATTA CCTGTGGTGC AATCAGTGGT
TTCCACTCGA CTCAAGCACC TATTATGGCG CGCTGCCTGA CCAACGAGAA ATACGTTCGC
CCCGTTTACT ATGGCGCTAT GGTGGCTGAA GGTGTTGTGG CTTGTGTGTG GGCGACTGCG
GGTATTGCAG CCTTCCCAGG TGGTTATGTT GAGCTTAAGA GCTTACTCGA CCAAGGTGGT
CCAGGCCTGG TCGTTAACCA AGTGGCCACT AGCTATCTTG GTGTATTAGG CGGTGTAATG
GCGATTATTG CGGTGGCTGT ATTCCCTATT ACCTCGGGTG ATACTGCATT TAGATCGCTG
CGCCTCACCA TTATCGACGC CTTTAACATC CCACAGAGTA TGCGTAACCG TTTGCTGGTG
GCTGCGCCTA TCCTGACTAT CGCTTACTTT ATGACTAAGA TCGACTTCTC CTTGATCTGG
CGTTATTTCG CCTTCTCAAA CATGCTGTTA TCGACAAGCG TGCTGTGGTT GGCGACTAAG
TACCTGTTCG ATAGAGGCAG CTTCCATTGG ATTGTGAGTT TGCCTGCGAT TGCCGGAACT
TGTGTGACCA TCTCTTACAT CATGACGGCG GGCATTGGTT TAGGTTTGCC TCAATCTCTG
AGCCAACCCG TGGGGATTGC GGTCGGCGTG GTGTGTTTAG TGGCCTTGAT TATTGCCCAT
AACAAACGTA AAACCGTGCT GGATACAAAC TCTTAA
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| Protein sequence | MFIFFLCLAL LVLAYKFYSP FVERQAGIDP KAQTPQARFE DGVDYVPVHP AKAFLIQFLN
VAGVGPIFGP ILGALYGPVA LLWIVLGNII GGAVHDYFSG VLSIKEDGKS LPEIAGHYFN
VYFKGVMLLF TAMLLFFVGV VFIMSPAGLL SNLDYFKDTI FGNNTFWVLV ILAYYFLATM
LPIDKIITKL YPAFGLLMIV MTTSIAVALL ISAPQLPEMG DVFAYFNHSH YNNELLEPNP
DGLPIWPLLF VTITCGAISG FHSTQAPIMA RCLTNEKYVR PVYYGAMVAE GVVACVWATA
GIAAFPGGYV ELKSLLDQGG PGLVVNQVAT SYLGVLGGVM AIIAVAVFPI TSGDTAFRSL
RLTIIDAFNI PQSMRNRLLV AAPILTIAYF MTKIDFSLIW RYFAFSNMLL STSVLWLATK
YLFDRGSFHW IVSLPAIAGT CVTISYIMTA GIGLGLPQSL SQPVGIAVGV VCLVALIIAH
NKRKTVLDTN S
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