Gene Shewana3_0887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0887 
Symbol 
ID4477098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1032465 
End bp1032941 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content52% 
IMG OID639725423 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_868531 
Protein GI117919339 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00152164 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.292323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC AAACACGGGT ATCGAATGTG ACATTGAGAC CCATAGGACA AGACGATCTG 
GAGTTGATCT TCACCCATCA ACAGGATCCG ATTGCGTCCC AATTGGCGCA ATTTCCCTCG
CGGGATCGTG AGGCATTTTA CCTTCATTGG CAGCAAAATA TTCTCGGACA GGCGTCGGTA
CTGGCACGGG GGATAGAAGT CGATGGCTTG CTGGTTGGCA ATATTGGCCA TTGGCATATG
GACGGTCAGG CGATGATTGG TTACTGGATT GACCGCGCAT TTTGGGGGCG TGGGGTAGCA
ACCTTAACCT TAAGCGCGTT TTTACCTTTA GTGACCTCAA GGCCGCTTTT TGCCCATGTA
GCACAGCATA ATCTTGCGTC CCAGCGGGTG TTGCTGCGCC ATGGGTTTGT AAAGATGGAC
AGACTCATTC AAGAGGCGGA CGATGTGGCG CCTTTGTTGG AGTTTGTGCT GCGCTGA
 
Protein sequence
MDKQTRVSNV TLRPIGQDDL ELIFTHQQDP IASQLAQFPS RDREAFYLHW QQNILGQASV 
LARGIEVDGL LVGNIGHWHM DGQAMIGYWI DRAFWGRGVA TLTLSAFLPL VTSRPLFAHV
AQHNLASQRV LLRHGFVKMD RLIQEADDVA PLLEFVLR