| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0884 |
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| Symbol | |
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| ID | 4477095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 1030101 |
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| End bp | 1030991 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639725420 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_868528 |
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| Protein GI | 117919336 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000164987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.231561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTA AAGTGCTGCG TTATTTTATC GAGATCATCG ATGCTGGCGG TTTCGGTAAG
GCCAGCGAAA AGGTTCACCT CACCCAACCC GCCCTCTCCA AGGCGCTGCG CCAATTAGAG
GAAGAACTCG ATCTGGTACT ACTCGAGCGC GGCAAACGTG GCACTCAGGT TAAGCTCACC
CAAGCGGGAG AAGTGGTCTA TCGCCATGGT AAGGAGTTAC TCGCAGGGCG ACAACGCATG
CTGGCCGAAC TCAGCGCCCA GCGCAGTTTA ACCGCAGGCG AATTAAAACT CGGTCTCGCG
CCACTCGGCA GTGCTGAAAT TTTTGCCCCT ATCATTGCCA AATATCGCCA GCAATATCCG
CAAATTGATA TGCACCTGCT GGTGCGCGGC GGCGTGGAGC AAACCTTAGC GATTCAAAAG
GGGGAAATTG AACTGGCCAC CGGGATTATC AACTTCGACG ATGGTTACCA CGGCATTCGG
GTGTTTAACG ATCCCATGGT GGTGGTGCTG CCCAAGGAGA ATCCCCTCAC CTCACAAGCT
ATGCTGTCGA TCCACGACTT AGTCGACGAG CCGCAAGTGA TGTTTGAAAC CGAATACACC
TTGTATCAAC TGGTGTTAAC CGCTTGCCAA CACGCCGGAT TTACTCCTAA AAACATCACT
CGAGTCAGCC AAGCCGACTT CGGGATCGCC CTTGTGGCGG CGGGCACGGG CGTGATGATA
CTGCCGCGCT CTATCGCGCG GCGTTACAGC GTATCTGGGG TGGTGAATAT TCCATTGGCG
AGCGATGAAC TGCGCTGGGA GTTATCACTG TTTTGGCGCA AAGAACAGGT ATTGTCCTTT
GCGGCACAGG CGATGATTGC GTTAGTGGAG AAACACTTAA CGCAAAAGTA G
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| Protein sequence | MDLKVLRYFI EIIDAGGFGK ASEKVHLTQP ALSKALRQLE EELDLVLLER GKRGTQVKLT
QAGEVVYRHG KELLAGRQRM LAELSAQRSL TAGELKLGLA PLGSAEIFAP IIAKYRQQYP
QIDMHLLVRG GVEQTLAIQK GEIELATGII NFDDGYHGIR VFNDPMVVVL PKENPLTSQA
MLSIHDLVDE PQVMFETEYT LYQLVLTACQ HAGFTPKNIT RVSQADFGIA LVAAGTGVMI
LPRSIARRYS VSGVVNIPLA SDELRWELSL FWRKEQVLSF AAQAMIALVE KHLTQK
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