Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0880 |
Symbol | |
ID | 4477091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1026759 |
End bp | 1027484 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725416 |
Product | ABC transporter related |
Protein accession | YP_868524 |
Protein GI | 117919332 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.152128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.31511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAACA TAACCAACCT ACACAAAAGT TACGGCGATA ATGCTGTTCT TAAGGGCATC AACGAACATA TTCGCCAAGG CGAAGTGGTG AGTGTTATCG GCCCTAGCGG CAGCGGTAAA AGCACCTTTT TACGTTGCAT CAACCTGTTA GAAAAACCCA CCCAAGGGGA TATTGAAATC GAAGGGCAAT CCATTACCGC CAAGGATGCC TGTGTCGACA AATTACGGCA AAAAGTGGGC ATGGTGTTCC AAAACTTCAA CCTGTTCCCC CATAAAACCG TATTGCAAAA CATTACCTTA GCGCCAGTGA GCCTAAAGTT AATGACCCAA GCCGAAGCCG ATAACAAGGC GTTGGCGCTG CTTACTCAAG TGGGGTTGCA GGATAAAGCC AATGCCTATC CTTCGAGTCT CTCGGGTGGA CAAAAACAAA GGGTTGCCAT TGCCCGCGCG CTGGCGATGG AGCCGGATCT GATGCTATTC GATGAGCCCA CCTCGGCACT CGACCCCGAA ATGGTCGGCG ATGTACTGGA TGTGATGAAG GACTTAGCGC AAAAAGGCAT GACCATGGTG ATTGTCACTC ATGAAATGGG CTTTGCACGC GATGTTTCCG ACAGAGTCAT CTTTATGGAT GGCGGCTATG TGGTGGAGTC CAATATCCCC GAGGAATTAT TCACCCGCCC CAAAGAAGCC AGAACCCAAA GCTTTTTAAG TAAGGTGCTG AGGTAA
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Protein sequence | MINITNLHKS YGDNAVLKGI NEHIRQGEVV SVIGPSGSGK STFLRCINLL EKPTQGDIEI EGQSITAKDA CVDKLRQKVG MVFQNFNLFP HKTVLQNITL APVSLKLMTQ AEADNKALAL LTQVGLQDKA NAYPSSLSGG QKQRVAIARA LAMEPDLMLF DEPTSALDPE MVGDVLDVMK DLAQKGMTMV IVTHEMGFAR DVSDRVIFMD GGYVVESNIP EELFTRPKEA RTQSFLSKVL R
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