Gene Shewana3_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0874 
Symbol 
ID4477085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1019552 
End bp1020304 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content46% 
IMG OID639725410 
ProductDSBA oxidoreductase 
Protein accessionYP_868518 
Protein GI117919326 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.117334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.991367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC CATTAGCCTT GGCTGTCGCC TTAATCATTG CACCATTTAG CGCCTTTGCC 
GCGAATTATG TTGAAGGTAC TCATTACACT CAAATCTCTG ACAAAGCGCC GAGCAGCGAA
CCCAAACTGA CTGAGTTTTT CTCCTTCTAT TGCCATAACT GCTTCAATAT GGAAACCAAC
TATCTGCCCG ATATCAAAGC GAACCTAAAC AAAGGCATTG CATTTGATAC TAAGCATGTC
GACTTTATGA ATAGCGACAT TGGCACCGAA GTGATGCGCT CGCTGGCAGT GATCCAAGAG
TTAGACAATA AAGATGCATT AACCCATGCG ATGTTCGCCG CCATCCAAGG CGAAGCAGGC
GCAAATGGCC ACGACCACAG TGCGCCAGGC CATAAACACG AACCACAAAT TAATAGCCGT
GACGACATTA AACAAGTCTT CGCTAAGTTT GGTATCGATG CGGCCAAGTA CGACAAACTG
GCTGACAGCA AGAGTACAGA TGAGAAGCTC GCCCTATGGC GTGCCCAGCA GAACCAATTC
CGCGTTGAAA GCGTACCTGC TTTTATCGTG AATGATAAAT ATGCCGTTAA CTTAAGCAGT
ATCAGAACCT TAGATGAATT AATTGGCCTG ATTAACTACC TAGCTGTCGA GAAAGATGCT
CAGGCACCTA AGAGTTCTGG TGGTAGCCTA AACTGGTTAT TCTTAGCCTT TGCCGCGGCG
ATTGCTCTCG GCCGTCAAAA GCGTTTGAGC TAA
 
Protein sequence
MIKPLALAVA LIIAPFSAFA ANYVEGTHYT QISDKAPSSE PKLTEFFSFY CHNCFNMETN 
YLPDIKANLN KGIAFDTKHV DFMNSDIGTE VMRSLAVIQE LDNKDALTHA MFAAIQGEAG
ANGHDHSAPG HKHEPQINSR DDIKQVFAKF GIDAAKYDKL ADSKSTDEKL ALWRAQQNQF
RVESVPAFIV NDKYAVNLSS IRTLDELIGL INYLAVEKDA QAPKSSGGSL NWLFLAFAAA
IALGRQKRLS