Gene Shewana3_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0873 
Symbol 
ID4477084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1018421 
End bp1019428 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content50% 
IMG OID639725409 
Productputative lipoprotein 
Protein accessionYP_868517 
Protein GI117919325 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.558011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC AAAAAAGTGC TCTAGCGATA GCGTTGACGG GTTTACTGTT TGGTTGCGGC 
GGCTCTGATT CGGGCGAGCC CGCCACTCAA ATGGCGACCT TTAGCCTAGG GGTTTCAGAT
AACCCCGCCG ATGCAAAATC GGTCACTATC GCATTTAGGC AGGTCGTGCT GAAGAACGAC
ACGGGTAGCT ACTCATTTAA TGTCACTCCA AATGGCGAGC TCAAATTTGT CGATCTATTA
GAGTTTCAAG GCAGCGCGGT AGAAACGCTG GTGAGTGGTC AATCCATTCC TGTCGGTGAA
TACCAAATGT GCCTGTATAT GAAAAACAGC ACAGTAGCCA ATAGCGAAAG CTCACACGTA
CAAACCTTCG ATGACACTCT TTATGGGCTA ACGACCAACA GCAATGGCTC ATGCGGTGGT
ATGGGCGCCG ATGAAAGTGA CACTGGCCGA TTGTTTTTTA ATAAAAAATT CACCATTGCG
GCGGGTGTAA ACAGCTTTGT CGCCGAGTTT GATTTAAGCA AAGGTCTGCA AGATCCCCAT
GGCAACAAGG ACTACTGGAC GCTGAAACCG ACTTCAGTGC AATTATTTAA TCAGTCCGAA
GTGGGTGCGA TTAAAGGCAC AGTGGGCGCG ACAGTGATGG AAGGCTGTGA AGTCGCCGCA
GGTGGCTCTG AGTTCTCGCC AGCGGTTTAT TTGTATCCCG CCAATACCAC GCTTGAGCAG
ATGAAAGATT TCAGAACCGA AGCTGACACG GCGACTGAAA TCGCACCTAT CGCCGCCGCT
CGGGTGAATG ATGTCACAGA CACAAACGGC CAAGTCGTCG GCCACGATTA TGAATTTGGT
TTTGTGGTCG CGGGTGATTA CAGCTTAGGC TATACCTGCT TAGCGCAAAA TGATGATCCG
GATGTGAGTA ACAATCCCGA TGATGTGGAA GCGCCTTTCT TTATCCATGC CGCAGAAACT
GGGGTGACAG TTACCGCTAA TGGCGTTGCT GAGCGTAACT TTCCGTAG
 
Protein sequence
MNIQKSALAI ALTGLLFGCG GSDSGEPATQ MATFSLGVSD NPADAKSVTI AFRQVVLKND 
TGSYSFNVTP NGELKFVDLL EFQGSAVETL VSGQSIPVGE YQMCLYMKNS TVANSESSHV
QTFDDTLYGL TTNSNGSCGG MGADESDTGR LFFNKKFTIA AGVNSFVAEF DLSKGLQDPH
GNKDYWTLKP TSVQLFNQSE VGAIKGTVGA TVMEGCEVAA GGSEFSPAVY LYPANTTLEQ
MKDFRTEADT ATEIAPIAAA RVNDVTDTNG QVVGHDYEFG FVVAGDYSLG YTCLAQNDDP
DVSNNPDDVE APFFIHAAET GVTVTANGVA ERNFP