Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0870 |
Symbol | |
ID | 4477081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 1015419 |
End bp | 1016624 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639725406 |
Product | major facilitator transporter |
Protein accession | YP_868514 |
Protein GI | 117919322 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAA CTCAAACCCA AAATCCAAAG GCATTACTGC TGTGGATGAC CTTTGTTATG TCGCTGGTCT TCGCCGTCTG GCAAGCCCTG CTGAATAACT TTGTGATTGA AAAAGCGCAA TTTACCGGCG CCGAAATCGG TATGCTGCAA AGCCTAAGGG AAATCCCCGG CTTCTTAGCC TTTACCGCTA TTTTTGTATT GCTGTTAGTG CGCGAACAAG CCTTTGCTCT GCTCTCATTA GCCCTGCTCT GTATTGGTGT GGCGATTACT GGCTTTTTTT CGCAGGTGTT GGGGTTATAT CTGACCACAA TTCTGATGTC AGTTGGGTTT CATTATTTTG AAACTATTAA CCAATCCCTC ACTCTGCAAT GGGTCGATAA ACAAGACACT GCGGCGTTTA TGGGTAAAGC CCTCGCATGG CGCTCGGCGG CGGCCTTAGT CGGTTATGGC AGTATTTGGC TAGTCATGAC CTGGCTGAAG CTAGATTACT GGCATATGTA TTTGATTATT GGTGTATTAG GTTTACTGAT GGTGATCAGC ATGAGCCTGT ATTACCCCCA GTTCGATACC CATGAAGTAC AACATAAAAA AGTCATCCTA CGTAAACGCT ACTGGCTGTA TTACTTACTG ACCTTCTTCT CCGGCGCCCG TCGGCAGATT TTTATGGTGT TTGCAGGCTT TATGATGGTC GAGAAATTCG GCTACAGCGT TAGTGAAATC ACCGCCCTGT TCCTTATCAA TTATGTGGTT AACCTGCTTT TCGCCCCAGC AATTGGCCGC TTTATCGGCC GTATTGGTGA ACGTAATGCC CTCACAGTGG AATACATTGG GCTGTTTTTT GTGTTTGTCA GCTATGCCCT TGTCGAACAA CCCCATATGG CCGCCGCGCT CTATGTGATT GACCATTTAC TGTTTGCGAT GGCGATAGCC ATGAAAACCT ATTTCCAAAA GATTGCCGAC AGCAAAGATA TTGCCGCCAC TATGTCAGTC AGCTTTACCA TTAACCATAT CGCCGCGGTC GTTATCCCCG TACTCTTAGG TCTGTTGTGG CTAAGCGATC CGGCCCTCGT CTTCTATATA GGTGCAGGCT TTGCGGTGTG CTCACTCGTG TTAGCTCTCA ATGTGCCGCG CCATCCATCC CCAGGTAATG AAACCTACTG GGCATGGCCA GCTAAAAGCA TTGATAAACC GAGTCTCGAC AGTTAA
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Protein sequence | MNATQTQNPK ALLLWMTFVM SLVFAVWQAL LNNFVIEKAQ FTGAEIGMLQ SLREIPGFLA FTAIFVLLLV REQAFALLSL ALLCIGVAIT GFFSQVLGLY LTTILMSVGF HYFETINQSL TLQWVDKQDT AAFMGKALAW RSAAALVGYG SIWLVMTWLK LDYWHMYLII GVLGLLMVIS MSLYYPQFDT HEVQHKKVIL RKRYWLYYLL TFFSGARRQI FMVFAGFMMV EKFGYSVSEI TALFLINYVV NLLFAPAIGR FIGRIGERNA LTVEYIGLFF VFVSYALVEQ PHMAAALYVI DHLLFAMAIA MKTYFQKIAD SKDIAATMSV SFTINHIAAV VIPVLLGLLW LSDPALVFYI GAGFAVCSLV LALNVPRHPS PGNETYWAWP AKSIDKPSLD S
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