| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0865 |
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| Symbol | |
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| ID | 4477076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1007803 |
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| End bp | 1009527 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639725401 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_868509 |
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| Protein GI | 117919317 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACT TGTGGCTATT AGCTATAGTG CTGTTTGGAT TAGTGGCTGG CTTAATCGCC
GGCCGCATTA ATCCCGCTGT GTTGTTTTTA TTTGCTTTTT TACTCTGTTA CCTCCTAGGA
ATGGTATCAC TCGACACGGC GCTCACTAGC TTTACCAACA CAGGTTTAGT CACTCTGGTG
TTATTGGTAC TGGCGGCGAC GGCGCTGGAA AAAACCTCAC TGCTGGGCAA GTTAAGCCAA
GTGATTGGCA ATAATTCGCT TGCGGTGACT ATGGCAAAAT TGGGATTTTC GACGGCGCTG
CTGTCCTCTT TTACCAATAA CACCGCCGTC GTCGCATCTT TGATTGGGGT GGTGCGCCGC
AATCAGGCCC ATGCTCCAGC TAAGTTGTTG TTGCCACTTA ACTATGCGGC GATTCTGGGC
GGTACGCTGA CCTTAATTGG TACTTCCACT AACCTTATCG TCAACTCGTT TGTCGAGAAT
GCGGGCTTGC CTGCGCTGGG GTTCTTTGAG TTCACCCCAG TGGCCATGCT GATTGTGCTG
TTAGGCATAG TGCTGCTGAT TGTGCTGGCT AATACCTTAC CCGACAGGCG AGAGGATTCG
ACCGAAGAGA CACTGCCCTA TCTGCTGGAA GCCCACGTGG CCAAAGGCTC GTCTTTAGTT
GGGCGTAGCG TGGTGGATAA CAAATTAAGA GCCCTGAAAA AGCTCTATTT AGTTGAGCTT
GAGCGCAGCG GTATTTGTAT TTGTCCGGTT CCACCACAGT TAGTGTTACA GGCGGACGAT
GTGCTGCGTT TCAGTGGCGC GGTGGAGTCG GTGGAGCTGT TGCATCAATT CGATGGCCTA
GATTGGTTTG GCAAACATCA AGCAAAAGGG CAAAACCTAG TCGAAGCCGT GTTGGCCCCT
TCATCGAGCC TAGTGGGTAG TACCTTAAAG GAGTCTCGCT TTCGCGAACA GTTTGATGCG
GCTGTAATGG CGATTCGTCG TGGTCATCAT CCGCTAAAAG GTGGTTTGGG CGATATCGTA
TTACAACCGG GCGATGTGTT ACTGCTGACG CCGGGGGATG GTTTTAGCAC CAATGCTAAG
CTGAGTACTG AATTTGCCGC CGTCAGCGGA CTCGATTTAA ATGTGCGCTT AGACAGCCGC
CGCAGCCGTT TTGTATTAAG CAGTTTTGTG ATCACCATTG TGCTTAGTCT GACCGGCGTA
TTACCGCTGG CCAAGGGCTT GGTGCTATTG CTGCTGAGCT ACTTTGCCAT TGGCGCCGTG
ACCTTGTCGG AGCTTAAGCG TCGCTTCCCA CTGGAATTAG TGGTGATAGT TGGCAGTGCC
TTAGGGCTGG CGAATCTGAT GATGAGCACT GGCCTTGCCG ATGGGTTAGC GCAAGGCTTG
CTCGGTACCA TCAATGGTTA TGGAGTGTTT GGCGCCTTTG TGGGTGTCTA TTTAGTCACC
TTATTGTTGA CTGAACTCGT TACCAATAAT GCCGCGGCGG CCTTGGCCTT TCCTATTGCC
TATGCGGTGG CGCTGAATTA TGGCGTCGAT CCTAGGCCAT TTATTATGGC GGTAGTGTTT
GGGGCCAGTG CCAGTTTTAT TTCGCCCTAC GGTTATCAAA CCAACTTGAT GGTGTTTAAC
GCGGGCAACT ATCGTTTCAG TGACTTTTTG CGCTTAGGGC TACCGCTATC TGTGCTTTAT
TCCCTGATAG TGATTTTTAT GGTGCCAGTC ATCTTTCCGT TTTAA
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| Protein sequence | MSDLWLLAIV LFGLVAGLIA GRINPAVLFL FAFLLCYLLG MVSLDTALTS FTNTGLVTLV
LLVLAATALE KTSLLGKLSQ VIGNNSLAVT MAKLGFSTAL LSSFTNNTAV VASLIGVVRR
NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAMLIVL
LGIVLLIVLA NTLPDRREDS TEETLPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL
ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP
SSSLVGSTLK ESRFREQFDA AVMAIRRGHH PLKGGLGDIV LQPGDVLLLT PGDGFSTNAK
LSTEFAAVSG LDLNVRLDSR RSRFVLSSFV ITIVLSLTGV LPLAKGLVLL LLSYFAIGAV
TLSELKRRFP LELVVIVGSA LGLANLMMST GLADGLAQGL LGTINGYGVF GAFVGVYLVT
LLLTELVTNN AAAALAFPIA YAVALNYGVD PRPFIMAVVF GASASFISPY GYQTNLMVFN
AGNYRFSDFL RLGLPLSVLY SLIVIFMVPV IFPF
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