Gene Shewana3_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0859 
Symbol 
ID4477070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp999571 
End bp1001307 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content46% 
IMG OID639725395 
Producthypothetical protein 
Protein accessionYP_868503 
Protein GI117919311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TTGTTATTGC TGCGGCAATT ATTGCAGCGG GAGCAGGTGC TTATTGGTAC 
ACTCAGCATG GAACTAGCTC GAGTGCTTCG GCCAATCCTT TGCTTGATTA TATCCCTGCC
GACACCCCAG TATTTTCAGG TCAGTTAAAA CCTTTCCCAC TGAAAAACTA CCTGCAATCT
ATTTCTGGCA ATTACCAGCA ATATTCAACA GATTCGTTGG CCGAATTAGG CGAATTAGAT
AGCCCTATGG CCAAGTTTTT TGTCAGCATC TATACGCAGT ATATGGATGG GATAAAAAAT
CCAACCCAAT TGCTTAAGAC CTTTGGTTTA CCAAATGAAG TCGAGCCTTT TTTCTACACC
TTAGGCGTGA TCCCTGTTCT TAAAACCAAT GTGGATCAAA TCGATGCATT TTGGGCCGTC
TTGGATAAAG CCGAGAAAGA CAGCGGCTTC ACCCATGAAA AGCGCACCTT AGCGGGCGTT
GATTATCGCG CTTATTCACT CGCCGAAGAA GGTTCTACTG AGAAGGTTGA CCTGTTATTT
GCCCATAAAG ATGGCATCTT AACTGTGACC TTGTCTGGCA CAACGATTGA GCCAGAAATC
TTAGAAATGG CCTTTGGATT AAAGAAACCG ACTCAATCCT TAGCCGCTTC AGGCATGCTG
AAAGACATCA TCAAAACCCA TGGTTTTATG GAAGATAGCA TCAGCTTTAT CAACCACGTT
GAGATTGTTA AAGCGATTAC CTCTCCCGAT GGCAATATGC TAGGCAAACA GCTCACTCAG
TTCATGGCAG AAGAAAGCCA AGGTGAAGAT CCTTTTGCTG AGATTCGCAC TCCTGAATGT
AAAACTGAGC TAACCGCCAT TGCCGCTAAC TGGCCTCGTA CTGTGGCTGG GTTAACCGCA
TTTAGCTCGA CCGAAAAAGA AAGCCATATG GCTGCCTCTT TTGTGGTTGA AAGCAAAAAC
CAGGCAATCT TAACCGCATT GCAAAAAATG CGCGGCTACA TTCCAACCCA CTTAGCCGAT
ATTAACAGCA CTATCTTCTC TATGGGGCTG GGGATTGACG TTAACGAAGT TGCGCCTTCA
CTGACGGCGA TCTGGGATGA CCTGCAAAAG CCGCAGTTAA CCTGCGCGCC GCTTGCCGAG
TTGCAAGCAG AGTTAAGCCA ACAGAGCCCT GCGATGTTAG GTATGTTTAC TGGCATGGCT
AATGGGGTTA AAGGTGTGAG CCTGTCATTG CTCGATTATA AGATGAGCAC ACAAGACCAA
GAGCCAAAGC TTGAAAGCTT AGATGCCTTA GTGAGCTTAA CGGCTGATAA TCCTTCAATG
CTGTTCAATA TGGTGAAACC TTTTGCTCCA ATGTTAGCTG AACTGCAAGT TGCGGATAAT
GGCGAGCCTA CCGACTTATC ACCACTGTTA ATGTTGCCAC CTGAGATGAA CATCAAGCCG
ATGCTGGCAA TTAAGGGACA ACACTTAGTG GTTTACTCTG GCGATAAAGG CTTAGCATTA
GCCAACAAAC TGGCTGGCGA GAAGCCATTG GCCAATGGGC TTTACAGCAT GTCGGCTGAT
TACGGTAAGA TGTTTACCCC GGTGCTGACC CTGTTAGAAC TGACTGGCGA GCCGATTCCT
GAAGAGCTGC AAATGCTGAA AGATTACAAT ATGCGCGTGC AAATGAGCTT CGATGTGAAC
AAACAAGGCA TAGTGTTTGG TTCTGTGATG AACTCAAAAG CGAGCGAGAA GAAGTAA
 
Protein sequence
MKKIVIAAAI IAAGAGAYWY TQHGTSSSAS ANPLLDYIPA DTPVFSGQLK PFPLKNYLQS 
ISGNYQQYST DSLAELGELD SPMAKFFVSI YTQYMDGIKN PTQLLKTFGL PNEVEPFFYT
LGVIPVLKTN VDQIDAFWAV LDKAEKDSGF THEKRTLAGV DYRAYSLAEE GSTEKVDLLF
AHKDGILTVT LSGTTIEPEI LEMAFGLKKP TQSLAASGML KDIIKTHGFM EDSISFINHV
EIVKAITSPD GNMLGKQLTQ FMAEESQGED PFAEIRTPEC KTELTAIAAN WPRTVAGLTA
FSSTEKESHM AASFVVESKN QAILTALQKM RGYIPTHLAD INSTIFSMGL GIDVNEVAPS
LTAIWDDLQK PQLTCAPLAE LQAELSQQSP AMLGMFTGMA NGVKGVSLSL LDYKMSTQDQ
EPKLESLDAL VSLTADNPSM LFNMVKPFAP MLAELQVADN GEPTDLSPLL MLPPEMNIKP
MLAIKGQHLV VYSGDKGLAL ANKLAGEKPL ANGLYSMSAD YGKMFTPVLT LLELTGEPIP
EELQMLKDYN MRVQMSFDVN KQGIVFGSVM NSKASEKK