Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0858 |
Symbol | mtgA |
ID | 4477069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | + |
Start bp | 998418 |
End bp | 999203 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639725394 |
Product | monofunctional biosynthetic peptidoglycan transglycosylase |
Protein accession | YP_868502 |
Protein GI | 117919310 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCC CTATGTATGC CATGCGCGAT CATGTCAATC GTCCTCAAGG GAATAAATCT AATCGTCCAG CACAAAAGCC CAAAGCGCGT GGCCTTAAGC GAATAGTCGC TTGGCTCGTT AAACTCATCT TAGGCTTATT ACTCGCCTCC ATTTTAAGCG TGGTGCTACT GCGTTTTATT GACCCGCCGA TGTGGACTTG GCGGATTGAA CGGGCATTAT TCCCGCCCGC ACCAGTGACA GAAGTGCGAC ATCAATGGCG CTCACTCGAG CAAATCTCCC CTGAATTACA ATTAGCCGTG ATTGCCGCAG AGGATCAAAA GTTTGCCAGC CACACGGGGT TTGATTTAGC CGCGATAAGT TCGGCCATTG AATACAATCA AAAGGGCAAC AAGGTTCGTG GTGCGAGTAC CTTAAGTCAG CAAGCGGCGA AAAACCTGTT TATGTGGTCG AGCCGCAGTT TTATCCGCAA GGGAATTGAG GCCTGGTTTA CCCTATTAAT GGAATTGATT TGGGATAAGT CGCGCATACT CGAAGTGTAT CTGAATATCG TCGAATTCGG CCCCGGAATA TATGGCGCCG AAGCCGCATC GAAACATTAT TTTGGTAAGA GTGCCGCCAA ATTAACCCGT TATGAGGCGT CATTATTAGC GGCGGTATTG CCTAATCCTT GGCGTTATAA AGTCTCGCCG CCTTCACCCT ATGTTGAGCA GCGCTCCGCT TGGATCCGTA AGCAAATGCG CCAGTTAGGG GAAGTGACTC TTAACCGTGT TCATCAGGCC GATTAA
|
Protein sequence | MTAPMYAMRD HVNRPQGNKS NRPAQKPKAR GLKRIVAWLV KLILGLLLAS ILSVVLLRFI DPPMWTWRIE RALFPPAPVT EVRHQWRSLE QISPELQLAV IAAEDQKFAS HTGFDLAAIS SAIEYNQKGN KVRGASTLSQ QAAKNLFMWS SRSFIRKGIE AWFTLLMELI WDKSRILEVY LNIVEFGPGI YGAEAASKHY FGKSAAKLTR YEASLLAAVL PNPWRYKVSP PSPYVEQRSA WIRKQMRQLG EVTLNRVHQA D
|
| |