Gene Shewana3_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_0858 
SymbolmtgA 
ID4477069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp998418 
End bp999203 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID639725394 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_868502 
Protein GI117919310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CTATGTATGC CATGCGCGAT CATGTCAATC GTCCTCAAGG GAATAAATCT 
AATCGTCCAG CACAAAAGCC CAAAGCGCGT GGCCTTAAGC GAATAGTCGC TTGGCTCGTT
AAACTCATCT TAGGCTTATT ACTCGCCTCC ATTTTAAGCG TGGTGCTACT GCGTTTTATT
GACCCGCCGA TGTGGACTTG GCGGATTGAA CGGGCATTAT TCCCGCCCGC ACCAGTGACA
GAAGTGCGAC ATCAATGGCG CTCACTCGAG CAAATCTCCC CTGAATTACA ATTAGCCGTG
ATTGCCGCAG AGGATCAAAA GTTTGCCAGC CACACGGGGT TTGATTTAGC CGCGATAAGT
TCGGCCATTG AATACAATCA AAAGGGCAAC AAGGTTCGTG GTGCGAGTAC CTTAAGTCAG
CAAGCGGCGA AAAACCTGTT TATGTGGTCG AGCCGCAGTT TTATCCGCAA GGGAATTGAG
GCCTGGTTTA CCCTATTAAT GGAATTGATT TGGGATAAGT CGCGCATACT CGAAGTGTAT
CTGAATATCG TCGAATTCGG CCCCGGAATA TATGGCGCCG AAGCCGCATC GAAACATTAT
TTTGGTAAGA GTGCCGCCAA ATTAACCCGT TATGAGGCGT CATTATTAGC GGCGGTATTG
CCTAATCCTT GGCGTTATAA AGTCTCGCCG CCTTCACCCT ATGTTGAGCA GCGCTCCGCT
TGGATCCGTA AGCAAATGCG CCAGTTAGGG GAAGTGACTC TTAACCGTGT TCATCAGGCC
GATTAA
 
Protein sequence
MTAPMYAMRD HVNRPQGNKS NRPAQKPKAR GLKRIVAWLV KLILGLLLAS ILSVVLLRFI 
DPPMWTWRIE RALFPPAPVT EVRHQWRSLE QISPELQLAV IAAEDQKFAS HTGFDLAAIS
SAIEYNQKGN KVRGASTLSQ QAAKNLFMWS SRSFIRKGIE AWFTLLMELI WDKSRILEVY
LNIVEFGPGI YGAEAASKHY FGKSAAKLTR YEASLLAAVL PNPWRYKVSP PSPYVEQRSA
WIRKQMRQLG EVTLNRVHQA D