| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0833 |
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| Symbol | |
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| ID | 4477044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 965846 |
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| End bp | 966814 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639725369 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_868477 |
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| Protein GI | 117919285 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAC CTCCAGTTCC TGAAAACGAG TTGCAGCGTT TAGCTACTCT AAGAGCGCTG
AATGTACTCG ATACCGATGC CGAAGAAAGA TTCGATAGGA TCACTCGATT GACTCGGCGG
ATCTTTTCAC TGCCCATTTG TTTAGTGACC CTAGTCGATG CGAATCGCCA GTGGTTTAAA
TCTCGCCAAG GGATAGAAGT GGAGCAAACC CCTAGGGATA TTTCCCTCTG CGCCCATGCG
ATTAATCATG ATGGGATTTT CGTTGTGCAT GATGCGCTAA AGGATCCACG CTTTTGTGAT
AATCCTTTAG TCACTGAGCC GCCCCATATT CGTTTTTATG TGGGTTACCC TCTTACCATC
CAAGGGGAAT ATCGGGTCGG TACTCTGTGC TTAATCGGTA ATGAACCGCG CGATTTTACC
GAAGAAGATG CCGAAACCTT AACGGATCTC GGGCAAATGG TGGAGGCTGA GCTCTTGTCC
ATCGCGCAAA ATACCTTAGA CCCACTGACC ATGATCTCCA ATCGCCGAGG GTTTGAGTTG
CTCGCCTATC AATCGCTGGC GAGTTGTCGT CGTACCGATG CTGAGGCTGC CTTAGTCTTT
TTCGACCTCG ACTTTTTTAA GGAGGTAAAC GATAGCTTTG GTCACCGTAA GGGCGACCAA
TTGCTCTATG ATTTTGCCCA TATTTTGATG GCGGCCTTTA GGGAGTCCGA TGTGATTGCA
CGGCTAGGCG GCGATGAGTT TGTGGTGCTA TTAAGTTTTA TCGAGCGCGA TACAGTGAAC
TTTGCGATTG AGCGCTTTAA GCTGTTACTT GGCGAGTATA ATCAACAACA TTCAGAGCAT
CCCCTCGAAA CCAGCATAGG CATAGCCCAT TGGTCGCCAG CATCGGATAT GAATCTGGAT
GATCTACTCG ACGCGGCCGA TCGAGCCATG TATCGAGATA AAGCGGTGCA TCACTTGGAT
AAGCCTTAG
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| Protein sequence | MQLPPVPENE LQRLATLRAL NVLDTDAEER FDRITRLTRR IFSLPICLVT LVDANRQWFK
SRQGIEVEQT PRDISLCAHA INHDGIFVVH DALKDPRFCD NPLVTEPPHI RFYVGYPLTI
QGEYRVGTLC LIGNEPRDFT EEDAETLTDL GQMVEAELLS IAQNTLDPLT MISNRRGFEL
LAYQSLASCR RTDAEAALVF FDLDFFKEVN DSFGHRKGDQ LLYDFAHILM AAFRESDVIA
RLGGDEFVVL LSFIERDTVN FAIERFKLLL GEYNQQHSEH PLETSIGIAH WSPASDMNLD
DLLDAADRAM YRDKAVHHLD KP
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