| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0829 |
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| Symbol | |
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| ID | 4477040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 958991 |
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| End bp | 960724 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639725365 |
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| Product | spermidine synthase |
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| Protein accession | YP_868473 |
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| Protein GI | 117919281 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAT CCCAAACAAC CAGCTCGGCG ACTCAAGCGG TACAAACGAG TCGCCTAAGC
TGGTTCGATG ATGTCCTACT ATTGGGCATT ATGGCCGTGC TCGCTGGGTG CGGCCTGATC
TACGAATACC TGTTGTCCCA CTACGCAGGC CGGATCTTAG GCGCGTTAGA AGCCGCCATT
TACACTATGA TCGGCCTGAT GATCGTCTCC ATGGGTCTTG GCGCCTTTGC CGCACGCAAA
ATTAAAGATG CCTTTACTGG CTTTGTGGTG CTGGAACTCA CGGTCGCGCT CTGTGGCTCG
CTGGCGATTT TAATTACCGC TGCCGTGATA GGTTTTGGTC AGCAGCTGCC GATGCTTATC
GCCTCCACCT TAGGTTTACC ACCGGATCAA CTGCCCGAAG GTGGCATGAT TGGCTCGCTG
CAAAAGCTGA GCGAACATCT GCCCTATGTC TGGGGCGTGC TGCTCGGCTT GATGATCGGG
ATGGAAATTC CGCTGATCGC GAGGGTGAGA CAATCCCTAT CAGATGAACA CTTACTGCAT
AATGCCGGTA CCATTTATGG CGCCGACTAT ATTGGTGCAG GCATTGGCGC GGCCATTTGG
GTCGGCTTTA TGCTGGCCAT CGATATTCAA CTCGCCGCAG CTCTGACCGC CAGCTTTAAC
TTGCTCGCCG GCTTTGTGTT TATCTGGCGT TTTTGGCCCA AAATCCAAAG AGCAAAATTA
TTGCTCGCGG GGCATTTTGT GGTCACGGGC GTATTATTAT TGCTCGCCAT TCAAGGGCCG
AGTTGGGAGC AACAGTTCAA CAATCTACTT TATAAAGACA AAGTGGTTTA CGCTAAGGCC
ACGCGTTTTC AACAACTTAC CTTTACCGAG CGCTTACGCG GCAATGGCCT CTCCCCCATA
TACTCTTTGT ATATCAATGG CCGATTACAG TTTTCGAGTA TCGATGAGCA TATCTACCAT
GCGTTTTTAG TTCACCCAAC GCTTGCGGCC AGCGCTCGCC ACAACAAGGT ATTAATCATT
GGTGGTGGTG ATGGACTGGG CCTAAAGCAA GTGCTGCGTT GGGAACCTGA GCAAGTGACC
TTGCTCGATC TTGATGCCGC ATTGGTGCAA CTCTTTAAAA CGCCCGATAC GGATATGCCT
AAACGCCTAA GCCAAGCCCT GTTAGCCCTT AATGGCAATG CCTTTAACGA TCCTCGCGTT
AAGGTGATTA ACGACGATGC CTTTAATGGA GTCGATAAAT TGATTGCCGC AGGAGATAAA
TACGACGCCA TTATTGTGGA CTTGCCCGAT CCTAGCCATC CCGATTTAAA TAAGCTCTAT
TCGGATTATT TCTATCGCAA GCTCAAGGAA CTAATGAGCA ATGATGGCGC TCTGACTGTA
CAGTCAACCT CACCCTATCA CGCGCAAAAG GCCTTTATCT CGGTAGCCAA AACCTTGGCC
TTAGCGGGGT TTGACGTAAA ACAGTATCAC CATAACGTCC CAAGCTTTGG AGAATGGGGC
TGGAGTATTG CCACCCTATC TGGAAAGGAT GCCCAGCATC GCCTTGGCGA GCTGACCACA
CTACCGATAG CGGATGACTG GTTAACCTTA GGTTTAGTCA AAGGTGCCTT TGAATTTCCT
GCCAATTTTT ATCAGGACGC CGCCAGTATT AAGCCTAACG AACTCGGTTC GTTACAGTTG
TACCATTATC ATCAACAGGC ATGGTCCGAA ACCCAAGGAC TGGATCTTTT TTAA
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| Protein sequence | MHESQTTSSA TQAVQTSRLS WFDDVLLLGI MAVLAGCGLI YEYLLSHYAG RILGALEAAI
YTMIGLMIVS MGLGAFAARK IKDAFTGFVV LELTVALCGS LAILITAAVI GFGQQLPMLI
ASTLGLPPDQ LPEGGMIGSL QKLSEHLPYV WGVLLGLMIG MEIPLIARVR QSLSDEHLLH
NAGTIYGADY IGAGIGAAIW VGFMLAIDIQ LAAALTASFN LLAGFVFIWR FWPKIQRAKL
LLAGHFVVTG VLLLLAIQGP SWEQQFNNLL YKDKVVYAKA TRFQQLTFTE RLRGNGLSPI
YSLYINGRLQ FSSIDEHIYH AFLVHPTLAA SARHNKVLII GGGDGLGLKQ VLRWEPEQVT
LLDLDAALVQ LFKTPDTDMP KRLSQALLAL NGNAFNDPRV KVINDDAFNG VDKLIAAGDK
YDAIIVDLPD PSHPDLNKLY SDYFYRKLKE LMSNDGALTV QSTSPYHAQK AFISVAKTLA
LAGFDVKQYH HNVPSFGEWG WSIATLSGKD AQHRLGELTT LPIADDWLTL GLVKGAFEFP
ANFYQDAASI KPNELGSLQL YHYHQQAWSE TQGLDLF
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