Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_0819 |
Symbol | |
ID | 4477030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008577 |
Strand | - |
Start bp | 947610 |
End bp | 950804 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639725355 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_868463 |
Protein GI | 117919271 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000319641 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.250381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGA TTACTATGTT CAAAGCGAGT GAAGTGCTGG CAGGCCGCTA CGATTCTGCC AATCTCGACG AACTGTTCAA AGCCGTCACC GACAACTACA TTGTCGATGA AGAACAATAC TTGTCAGAGC TAATCAAACT AGTGCCCTCC AGTGATGAAG CCATCGAGCG CGTCACTCGT CGTGCCCACG AACTGGTCAA CAAAGTTCGT CAATTCGATA AGAAAGGTTT AATGGTTGGC ATCGACGCCT TCCTGCAGCA ATACAGCTTA GAAACACAGG AAGGGATTAT CCTGATGTGT TTAGCCGAAG CCCTGCTGCG TATTCCCGAT GCGGCCACCG CCGACGCCTT GATTGAAGAT AAACTCTCAG GCGCAAAATG GGATGAACAC TTAAGCAAGA GCGATTCGGT ACTGGTTAAC GCCTCCACTT GGGGCTTAAT GCTCACTGGC AAAATCGTCA AACTCGATAA AAAAATCGAT GGTACGCCAA GCAACCTGTT AAGCCGTTTA GTAAACCGTT TAGGTGAGCC TGTGATCCGC CAAGCCATGA TGGCGGCGAT GAAGATCATG GGTAAGCAGT TCGTTCTCGG TCGCACCATG AAAGAAGCGC TCAAGAACAG TGAAGACAAG CGTAAATTAG GTTATACCCA CTCCTACGAT ATGCTGGGTG AAGCCGCGCT GACGCGTAAG GATGCCGAAA AATACTTTAA CGATTATGCC AATGCGATTA CCGAGTTAGG CGCGCAAAGC TATAACGAAA ACGAATCTCC ACGCCCAACC ATTTCGATCA AGCTGTCGGC ACTGCACCCA CGTTACGAAG TCGCTAACGA AGACCGTGTA CTGACCGAGC TGTATGACAC AGTTATTCGC CTGATTAAGT TAGCCCGTGG CTTAAATATC GGTATTTCTA TCGACGCCGA AGAAGTTGAC CGCCTCGAAC TGTCATTAAA ACTGTTCCAA AAGCTGTTTA ACGCTGACGC CACTAAGGGT TGGGGCTTAC TCGGTATCGT AGTGCAAGCT TACTCTAAGC GCGCCCTGCC TGTACTGGTA TGGTTAACCC GTCTAGCGAA AGAGCAAGGC GACGAAATTC CGGTTCGCTT AGTGAAAGGC GCTTACTGGG ATAGTGAGCT GAAATGGGCA CAACAAGCTG GCGAAGCCGC ATACCCACTC TACACCCGCA AAGCAGGTAC CGACGTATCT TACTTAGCCT GTGCGCGTTA CCTGTTATCT GACGCCACCC GCGGCGCGAT TTACCCCCAA TTTGCCAGCC ACAACGCGCA AACCGTTGCC GCGATTTCAG ATATGGCGGG CGATCGTAAC CACGAGTTCC AACGCCTACA CGGCATGGGA CAAGAGCTGT ACGACACTAT TCTGTCGGAA GCTGGCGCGA AAGCGGTACG TATCTACGCC CCAATCGGTG CCCATAAAGA TCTACTGCCC TACTTAGTGC GTCGCCTACT GGAAAACGGT GCGAACACCT CGTTCGTACA CAAGCTGGTC GATCCTAAAA CCCCTATCGA GTCTTTAGTG GTTCACCCAC TGAAAACCCT GACAGGCTAC AAAACCCTGG CTAACAACAA AATCGTTTTA CCTACCGACA TCTTCGGTAG CGATCGCAAA AATTCCAAGG GACTCAATAT GAACATCATT TCAGAAGCAG AGCCATTCTT CGCGGCCTTA GACAAATTCA AATCGACGCA GTGGCAAGCG GGCCCTCTGG TTAATGGCCA AACCTTAACT GGCGAGCACA AAACCGTGGT GAGCCCATTC GATACCACCC AAACTGTGGG TCAAGTGGCC TTTGCTGACA AAGCGGCTAT CGAACAAGCT GTGGCCTCTG CCGATGCGGC GTTTGCAACT TGGACTCGTA CTCCGGTTGA AGTACGCGCC TCAGCCCTGC AAAAGCTTGC GGACCTGTTA GAAGAAAACC GCGAAGAACT GATTGCTCTG TGTACCCGTG AAGCGGGCAA GAGCATTCAA GACGGTATCG ATGAAGTGCG TGAAGCCGTA GACTTCTGCC GCTACTACGC GGTGCAAGCT AAGAAGCTGA TGTCAAAACC TGAACTGCTC CCTGGCCCAA CGGGTGAATT AAACGAACTC TTCCTCCAAG GTCGCGGTGT GTTCGTCTGT ATCAGCCCAT GGAACTTCCC ATTGGCTATC TTCCTAGGCC AAGTATCAGC AGCCCTCGCT GCGGGTAACA CTGTAGTAGC TAAACCTGCA GAGCAAACCT CTATCATTGG TTACCGTGCA GTGCAGCTCG CACACCAAGC GGGTATTCCA ACGGACGTGC TGCAATATCT ACCAGGCACA GGCGCTACCG TAGGTAACGC ACTGACGGCA GATGAGCGCA TCGGCGGCGT ATGTTTTACC GGTTCAACGG GCACAGCCAA ACTCATCAAC CGCACACTGG CCAACCGTGA AGGCGCAATT ATTCCATTAA TCGCCGAAAC TGGTGGTCAA AACGCTATGG TGGTTGACTC TACTTCTCAG CCAGAACAAG TGGTTAACGA TGTAGTATCT TCATCCTTCA CCAGCGCGGG TCAACGCTGC TCGGCGCTGC GTGTACTCTT CCTACAGGAA GATATTGCTG ACCGCGTTAT CGACGTACTC CAAGGTGCGA TGGATGAGTT AGTGATTGGC AACCCAAGTT CAGTGAAAAC CGACGTAGGC CCAGTTATCG ATGCGACCGC GAAGGCGAAC CTTGACGCCC ATATCGACCA CATCAAGCAA GTGGGCAAGC TTATCAAGCA AATGTCCCTG CCAGCGGGCA CTGAAAACGG TCACTTTGTG TCGCCAACTG CCGTTGAAAT CGACTCAATC AAAGTGCTTG AAAAAGAACA CTTTGGTCCA ATCCTGCACG TAATCCGTTA CAAGGCATCT GAACTTGCCC ATGTGATCGA TGAAATCAAC AGCACAGGCT TTGGCTTAAC CTTAGGTATC CACAGCCGTA ACGAAGGCCA TGCCCTCGAA GTAGCTGACA AGGTTAACGT AGGTAACGTG TACATCAACC GTAACCAAAT CGGCGCAGTC GTTGGCGTAC AGCCTTTCGG CGGCCAAGGT CTGTCAGGCA CAGGTCCAAA AGCCGGTGGT CCACACTACT TAACTCGCTT CGTGACTGAA AAGACACGCA CTAACAACAT CACCGCTATC GGTGGTAATG CGACCCTGTT GTCACTGGGT GATAGCGACG CCTAA
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Protein sequence | MEAITMFKAS EVLAGRYDSA NLDELFKAVT DNYIVDEEQY LSELIKLVPS SDEAIERVTR RAHELVNKVR QFDKKGLMVG IDAFLQQYSL ETQEGIILMC LAEALLRIPD AATADALIED KLSGAKWDEH LSKSDSVLVN ASTWGLMLTG KIVKLDKKID GTPSNLLSRL VNRLGEPVIR QAMMAAMKIM GKQFVLGRTM KEALKNSEDK RKLGYTHSYD MLGEAALTRK DAEKYFNDYA NAITELGAQS YNENESPRPT ISIKLSALHP RYEVANEDRV LTELYDTVIR LIKLARGLNI GISIDAEEVD RLELSLKLFQ KLFNADATKG WGLLGIVVQA YSKRALPVLV WLTRLAKEQG DEIPVRLVKG AYWDSELKWA QQAGEAAYPL YTRKAGTDVS YLACARYLLS DATRGAIYPQ FASHNAQTVA AISDMAGDRN HEFQRLHGMG QELYDTILSE AGAKAVRIYA PIGAHKDLLP YLVRRLLENG ANTSFVHKLV DPKTPIESLV VHPLKTLTGY KTLANNKIVL PTDIFGSDRK NSKGLNMNII SEAEPFFAAL DKFKSTQWQA GPLVNGQTLT GEHKTVVSPF DTTQTVGQVA FADKAAIEQA VASADAAFAT WTRTPVEVRA SALQKLADLL EENREELIAL CTREAGKSIQ DGIDEVREAV DFCRYYAVQA KKLMSKPELL PGPTGELNEL FLQGRGVFVC ISPWNFPLAI FLGQVSAALA AGNTVVAKPA EQTSIIGYRA VQLAHQAGIP TDVLQYLPGT GATVGNALTA DERIGGVCFT GSTGTAKLIN RTLANREGAI IPLIAETGGQ NAMVVDSTSQ PEQVVNDVVS SSFTSAGQRC SALRVLFLQE DIADRVIDVL QGAMDELVIG NPSSVKTDVG PVIDATAKAN LDAHIDHIKQ VGKLIKQMSL PAGTENGHFV SPTAVEIDSI KVLEKEHFGP ILHVIRYKAS ELAHVIDEIN STGFGLTLGI HSRNEGHALE VADKVNVGNV YINRNQIGAV VGVQPFGGQG LSGTGPKAGG PHYLTRFVTE KTRTNNITAI GGNATLLSLG DSDA
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